Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Volvox_20carteri_20f._20nagariensis_20[refseq_20GCF_5F000143455.1_20
2010-07-08] 1,251 sequences; 137,684,403 total letters
Query= NC_031944.1
Length=185102
Score E
Sequences producing significant alignments: (Bits) Value
seq10 203 4e-47
seq102 105 8e-18
>seq10
Length=2191866
Score = 203 bits (224), Expect = 4e-47
Identities = 207/270 (77%), Gaps = 0/270 (0%)
Strand=Plus/Minus
Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411
|| ||| | ||| | || || ||||| ||||| || || ||||||||||||| || |
Sbjct 2092372 TTTTGTGAGTGGATCACTTCAACTGAGAACCGCCTTTACATCGGTTGGTTCGGTGTAATC 2092313
Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471
|||||||| || || || | ||||| | || |||||||| ||||||| ||||||
Sbjct 2092312 ATGATCCCATGTCTTCTTACTGCAACATCAGTATTTATCATCGCTTTCATCGCTGCTCCG 2092253
Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531
|| || |||||||| || || || ||||| ||| | |||||||| | ||||||||||||
Sbjct 2092252 CCAGTAGACATCGATGGTATTCGTGAACCAGTTTCAGGTTCTCTTCTTTATGGTAACAAC 2092193
Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591
|||||| | ||||||||||| || |||| ||||| ||||| || || ||||| || ||
Sbjct 2092192 ATCATCACAGGTGCTGTTGTTCCAACTTCTAACGCTATCGGCCTGCATTTCTACCCAATT 2092133
Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTG 169621
|||||||| || ||| ||||| ||||||
Sbjct 2092132 TGGGAAGCTGCTTCTCTAGATGAGTGGTTG 2092103
>seq102
Length=298891
Score = 105 bits (116), Expect = 8e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 167448 TACATCCTTGACGCGGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGCCGTGCAGGC 167507
||| | || |||||||| ||||| || ||| ||||| | ||||| ||||||||||||
Sbjct 97698 TACCTGCTGGACGCGGCCGAGGAGGCTGGTATGGACCTGCCGTACTCTTGCCGTGCAGGC 97757
Query 167508 GCTTGTTCGTCGTGCGCGGGAAAACTCATCTCTGGCACCGTAGATCAAAGCGATCAATCC 167567
||||| || ||||| || || | | || |||||||| || || ||||| || |
Sbjct 97758 GCTTGCTCTAGCTGCGCCGGCAAGATTGTGTCGGGCACCGTGGACCAGAGCGACCAGAGC 97817
Query 167568 TTCCTGGACGATGATCAAATTGCCGAAGGTTTCCTTCTCACCTGTGTGTCCTA 167620
|||||||||||| | || || | | || ||| | |||||||| ||| ||||
Sbjct 97818 TTCCTGGACGATAAGCAGATGGAGGCTGGCTTCGTGCTCACCTGCGTGGCCTA 97870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592189139497520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |