Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq4573 89.7 4e-13 seq19262 84.2 2e-11 >seq4573 Length=120409 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || |||||||| || | || ||||| ||||||||||||||| Sbjct 7900 GACAAGGAAGGTATCCCACCTGATCAACAGAGGTTGATATTTGCCGGCAAACAATTGGAA 7959 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 ||| | |||| |||| || |||||||| || ||||| || || |||||| |||| || Sbjct 7960 GATGGCCGAACTCTGGCAGACTACAATATCCAGAAGGAGTCAACACTTCACCTGGTTTT 8018 >seq19262 Length=114341 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || |||||| | || |||||||| || | || ||||| ||||||||||||||| Sbjct 46652 GACAAGGAAGGTATCCCGCCTGATCAACAGAGGTTGATTTTTGCCGGCAAACAATTGGAA 46593 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 ||| | |||| |||| || ||||| || || ||||| || || |||||| |||| || Sbjct 46592 GATGGCCGAACTCTGGCAGACTACAACATCCAGAAGGAGTCAACACTTCACCTGGTTTT 46534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410663019015494