Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16]
26,721 sequences; 604,217,145 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq2938 127 1e-24
seq5804 125 5e-24
seq4434 122 6e-23
seq19972 116 2e-21
seq8351 116 2e-21
seq17719 113 3e-20
seq2905 109 4e-19
seq892 105 4e-18
seq26701 102 5e-17
seq12303 100 2e-16
seq9252 100 2e-16
seq11116 96.9 2e-15
seq22277 95.1 8e-15
seq21627 95.1 8e-15
seq7849 95.1 8e-15
>seq2938
Length=28785
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| | || | ||| || ||||| | || ||||||||| ||||||||||| |
Sbjct 10271 CCGCCTCTGAGACGCAGTACAAGGTGGAGGGTCGATTCTTTCTGGATGTTGTAGTCAGCG 10212
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| |||||||||||||||| |||||| || ||
Sbjct 10211 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCTGCGAAAATGAGCCTCTGCTGATCCGGAGGG 10152
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | |||| ||| ||
Sbjct 10151 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACC 10092
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| ||||||||||| ||||||||||| |||||||||
Sbjct 10091 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAAATCTGCATC 10044
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || ||||||||| ||||||||||| | || ||| ||||
Sbjct 10484 AGCACCAAGTGGAGGGTCGATTCTTTCTGGATGTTGTAGTCTGCGAGGGTTCGGCCGTCC 10425
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||| ||||||| |||||| || || | | |||||| ||
Sbjct 10424 TCAAGCTGCTTTCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGGATACCCTCCTTATCC 10365
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | |||| ||| || || | ||||||||
Sbjct 10364 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTC 10305
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||||||||| || || ||||| ||||||||
Sbjct 10304 TTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 10273
Score = 89.7 bits (98), Expect = 3e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || ||||||||| || |||||||| | || ||| | ||
Sbjct 10712 AGCACCAAGTGGAGGGTCGATTCTTTCTGGATATTGTAGTCCGCGAGTGTGCGGCCATCT 10653
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||| ||||| | ||||||||| || | || ||| |||||
Sbjct 10652 TCAAGCTGCTTTCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATGCCCTCTTTGTCC 10593
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | |||| ||| || || | ||||||||
Sbjct 10592 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTC 10533
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || || || || |||||||||||
Sbjct 10532 TTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 10501
>seq5804
Length=153150
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | || ||||||||| ||||||||||||| || ||| ||||
Sbjct 32773 AGCACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCC 32714
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||| ||||| | ||||||||| || | || |||||||||
Sbjct 32713 TCGAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 32654
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | |||| || || || | ||||||||
Sbjct 32653 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCTACCTCAAGGGTGATGGTC 32594
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||||||||| ||||||||||||||||||||
Sbjct 32593 TTGCCGGTGAGGGTTTTCACAAAGATCTGCAT 32562
Score = 118 bits (130), Expect = 7e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | || ||||||||| ||||||||||||| || ||| ||||
Sbjct 32545 AGCACCAGGTGGAGGGTGGATTCTTTCTGAATGTTGTAGTCGGCGAGGGTTCGGCCGTCC 32486
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || || || ||||||| |||||| || || | | |||||||||
Sbjct 32485 TCGAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGATCCGGAGGGATTCCCTCCTTGTCC 32426
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | |||| || || || | ||||||||
Sbjct 32425 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTC 32366
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||||||||| |||||||||||||||||||||
Sbjct 32365 TTGCCGGTGAGGGTTTTCACAAAGATCTGCATC 32333
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || |||||||||||| |||||||||| ||| || | ||
Sbjct 33001 AGCACCAAGTGGAGGGTCGATTCTTTCTGTATATTGTAGTCGGCCAGGGTGCGCCCATCC 32942
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
||||| ||||| || || || ||||||| ||||||||| || | || |||||||||
Sbjct 32941 TCCAATTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCC 32882
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | || | || || || | || || ||
Sbjct 32881 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCGAGGGTAATAGTC 32822
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||||||||| || || || ||||| ||||||
Sbjct 32821 TTGCCGGTGAGGGTCTTGACGAAGATTTGCATC 32789
>seq4434
Length=125464
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | |||||||| ||| | || ||| ||||| ||||| ||||||| |
Sbjct 10252 CCACCACGCAGGCGCAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTATAGTCGGCC 10311
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| | || ||||||||||| ||||| || || |||| ||||||||| ||
Sbjct 10312 AAGGTACGCCCATCCTCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCCGGTGGA 10371
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||| ||||| ||| || ||||| | || | |||| | |||| ||| ||
Sbjct 10372 ATTCCCTCTTTGTCCTGGATC-TTGGCTTTGACATTGTCTATGGTGTCGGAGCTTTCCAC 10430
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct 10431 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCATC 10479
>seq19972
Length=4408
Score = 116 bits (128), Expect = 2e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | ||| || ||||| ||||||||||| | |
Sbjct 4037 CCGCCGCGGAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCC 3978
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| |||| || | |||||| || ||||| ||||||||||||||||| ||
Sbjct 3977 AAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 3918
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | || | || |||||
Sbjct 3917 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 3858
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | || ||||| || || || || |||||||| |||||||||||
Sbjct 3857 TCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 3811
>seq8351
Length=11701
Score = 116 bits (128), Expect = 2e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | ||| || ||||| ||||||||||| | |
Sbjct 2881 CCGCCGCGGAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCC 2822
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| |||| || | |||||| || ||||| ||||||||||||||||| ||
Sbjct 2821 AAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCCGGTGGG 2762
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | || | || |||||
Sbjct 2761 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 2702
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | || ||||| || || || || |||||||| |||||||||||
Sbjct 2701 TCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 2655
>seq17719
Length=101630
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | ||||||||||| | ||| || ||||| |||||||| |||| |
Sbjct 79455 CCGCCTCGGAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAATCGGCC 79396
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| |||| || | |||||| || ||||| ||||||||||||||||| ||
Sbjct 79395 AAAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGA 79336
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | || | || |||||
Sbjct 79335 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 79276
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | || ||||| || || || || |||||||| |||||||||||
Sbjct 79275 TCGAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 79229
>seq2905
Length=56485
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || || ||||| ||||||||||||| || || ||||
Sbjct 52746 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCC 52687
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || ||||| || |||||||||||||| || | || ||||||||
Sbjct 52686 TCCAGCTGTTTTCCGGCGAAGATCAGCCGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCT 52627
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||| | || | | || | |||| |||||||| || | || || ||
Sbjct 52626 TGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAGGATTCGACCTCTAGGGTAATAGTC 52567
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| || || || |||||||| ||||||||||||
Sbjct 52566 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 52534
>seq892
Length=123481
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||||||||| | || || ||||| |||||||||||||
Sbjct 88257 CCTCCGCGAAGGCGGAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 88316
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| |||| ||| || || ||||| || || ||||||||||| ||
Sbjct 88317 AGGGTGCGACCGTCCTCCAGCTGTTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGAGGA 88376
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||| ||||| ||||| ||| | || | | || | || | ||||| ||
Sbjct 88377 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGATGATTCAACC 88436
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | || ||||| || || || || |||||||| ||||||||||||
Sbjct 88437 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 88484
>seq26701
Length=70828
Score = 102 bits (112), Expect = 5e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||||| || ||| ||||||||||||||||| | || ||| | ||
Sbjct 32716 AGGACAAGGTGTAGGGTCGATTCCTTCTGTATGTTGTAGTCTGCTAGGGTGCGGCCATCC 32657
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296
|||| ||| ||||| ||||| || |||| ||||||||| | ||| | || ||||||||
Sbjct 32656 TCCAGCTGTTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCT-TCCTTGTC 32598
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | || | | || | |||| ||| || || | ||||||||
Sbjct 32597 TTGAATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGT 32538
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| ||||| || || || |||||||||||
Sbjct 32537 CTTGCCTGTGAGGGTCTTAACGAAGATCTGCAT 32505
Score = 84.2 bits (92), Expect = 1e-11
Identities = 150/217 (69%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| | ||| || ||||| ||||||||||| | || ||| ||||
Sbjct 32260 AGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCTAGGGTGCGGCCGTCC 32201
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || || || || |||| |||||||| || | || || |||||
Sbjct 32200 TCGAGCTGCTTTCCAGCAAAGATCAGCCTTTGCTGGTCTGGTGGGATGCCTTCTTTGTCC 32141
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC-GA---TTCGACGTCCACCGTGAT 34353
|||||| ||| | || |||||| ||| || ||| || || | |||||
Sbjct 32140 TGGATCTTTGCCTTGACAT----TATCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGAT 32085
Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||| ||||||||||| || || || ||||||||||||
Sbjct 32084 GGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATC 32048
Score = 84.2 bits (92), Expect = 1e-11
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || || ||||| | || ||| ||||| || |||||||| | |
Sbjct 32959 CCACCGCGGAGGCGGAGGACAAGGTGCAGGGTCGATTCCTTCTGAATATTGTAGTCAGCC 32900
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
|| ||| | || || | ||| || || || || || |||| |||||| || | |||
Sbjct 32899 AGGGTGCGGCCATCCTCAAGCTGTTTTCCAGCAAAGATCAGCCTCTGCTGATCCGGTGGG 32840
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| || |||||||| ||||| ||||| | || | | || | || | ||| |
Sbjct 32839 ATCCCT-TCCTTGTCTTGAATCTTG-GCTTTGACATTGTCAATGGTGTCAGAGCTTTCCA 32782
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | ||||||||| ||||| ||||| || || ||||||||||||||
Sbjct 32781 CCTCGAGCGTGATGGTCTTGCCTGTGAGGGTCTTAACAAAGATCTGCAT 32733
>seq12303
Length=64598
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||| ||| | || ||| ||||| ||||| ||||||| |
Sbjct 10826 CCACCACGCAGGCGAAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTATAGTCGGCC 10885
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| | || ||||||||||| || || || || | || ||||||||| ||
Sbjct 10886 AAGGTACGCCCATCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGG 10945
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||| || |||||| ||| | || | || | |||| || ||
Sbjct 10946 ATACCCTCCTTATCTTGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTCTCCACC 11005
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||||||||||||||| || || ||||| ||||||||||||
Sbjct 11006 TCGAGAGTGATGGTTTTGCCGGTAAGGGTCTTCACGAAGATCTGCATC 11053
>seq9252
Length=190322
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||||||||| | || ||| ||||| ||||||||||||| |
Sbjct 60280 CCTCCGCGAAGTCGTAGCACCAGGTGGAGCGTTGATTCCTTCTGGATGTTGTAGTCGGCC 60221
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | || || || ||||| || || || || ||||| ||
Sbjct 60220 AGGGTTCGGCCGTCTTCTAGTTGTTTTCCGGCGAAGATCAGGCGTTGTTGGTCCGGAGGT 60161
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||| ||||| ||||| ||| | || | | || | |||| || |||||
Sbjct 60160 ATGCCCTCTTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACC 60101
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | || || || || ||||| | |||||||| ||||||||||||
Sbjct 60100 TCTAGGGTTATCGTCTTCCCGGTTAAGGTTTTCACGAAGATCTGCATC 60053
>seq11116
Length=53430
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || |||| ||||||||||| | || ||| ||||| ||||||||||||| |
Sbjct 28190 CCGCCCCGAAGCCGGAGCACCAGGTGGAGTGTCGATTCCTTCTGGATGTTGTAGTCGGCC 28131
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | || || || ||||| || || || || ||||| ||
Sbjct 28130 AGTGTTCGGCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAGGCGTTGTTGGTCCGGAGGT 28071
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||| ||||| ||||| ||| | || | | || | || | || || ||
Sbjct 28070 ATTCCCTCTTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCTGAGGACTCCACC 28011
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | || || || || ||||| || |||||||| ||||||||||||
Sbjct 28010 TCTAGGGTTATCGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATC 27963
>seq22277
Length=3790
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||| | ||| |||| |||| |||||| || || ||
Sbjct 1266 TCCTTCTGGATGTTGTAGTCGGCTAAAGTCCGGCCGTCCTCCAGCTGCTTTCCGGCAAAG 1207
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| ||||| |||||||| || | | || ||||| |||||| ||| | || |
Sbjct 1206 ATCAGCCGTTGCTGGTCCGGTGGGATTCCTTCTTTGTCCTGGATCTTTGCCTTGACATTG 1147
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | |||| ||| || || | |||||||| ||||| ||||| || |||||
Sbjct 1146 TCAATGGTGTCGGAGCTTTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACG 1087
Query 34379 AAGATCTGCATC 34390
||||||||||||
Sbjct 1086 AAGATCTGCATC 1075
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| |||||||| |||||||| | |||| ||| |||| || | ||| || || |||||
Sbjct 1723 TTCCTTCTGTATATTGTAGTCCGCCAGCGTGCGGCCGTCCTCAAGCTGTTTTCCAGCGAA 1664
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| |||| ||||||||| || | | |||||||| ||||| ||| | ||
Sbjct 1663 GATCAGCCTCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 1604
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | || | |||||| || | ||||| || ||||| ||||| || |||||
Sbjct 1603 ATCAATAGTGTCAGAGCTTTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTCAC 1544
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 1543 AAAGATCTGCAT 1532
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||| || | || ||| | || |||| ||| ||||| || ||
Sbjct 1951 TTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAA 1892
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| |||| |||||| || || | | ||||||||| || ||| ||| | ||
Sbjct 1891 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGAATTTTTGCCTTGACATT 1832
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | ||| | |||||| || | || || ||||| |||||||| ||||| ||
Sbjct 1831 GTCGATGGTATCAGAGCTTTCGACCTCGAGGGTAATCGTTTTCCCGGTGAGGGTTTTGAC 1772
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 1771 AAAGATCTGCAT 1760
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || ||| |||| || | |||||| || || ||
Sbjct 1494 TCCTTCTGGATGTTGTAGTCTGCTAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAAG 1435
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| ||||| |||||||| || | | |||||||| ||||| ||| | ||
Sbjct 1434 ATCAGCCGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 1375
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | |||||| || | ||||||||||| || ||||| || ||||||
Sbjct 1374 TCAATGGTGTCAGAGCTTTCGACTTCTAGGGTGATGGTTTTTCCCGTGAGGGTCTTCACA 1315
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 1314 AAGATCTGCAT 1304
>seq21627
Length=4779
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| |||||||| |||||||| | |||| ||| |||| || | ||| || || |||||
Sbjct 3059 TTCCTTCTGTATATTGTAGTCCGCCAGCGTGCGGCCGTCCTCAAGCTGTTTTCCAGCGAA 3118
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| |||| ||||||||| || | | |||||||| ||||| ||| | ||
Sbjct 3119 GATCAGCCTCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 3178
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | || | |||||| || | ||||| || ||||| ||||| || |||||
Sbjct 3179 ATCAATAGTGTCAGAGCTTTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTCAC 3238
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 3239 AAAGATCTGCAT 3250
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||| | ||| |||| |||| |||||| || || ||
Sbjct 3516 TCCTTCTGGATGTTGTAGTCGGCTAAAGTCCGGCCGTCCTCCAGCTGCTTTCCGGCAAAG 3575
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| ||||| |||||||| || | | || ||||| |||||| ||| | || |
Sbjct 3576 ATCAGCCGTTGCTGGTCCGGTGGGATTCCTTCTTTGTCCTGGATCTTTGCCTTGACATTG 3635
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | |||| ||| || || | ||||| || ||||| ||||| || |||||
Sbjct 3636 TCAATGGTGTCGGAGCTTTCAACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTCACG 3695
Query 34379 AAGATCTGCATC 34390
||||||||||||
Sbjct 3696 AAGATCTGCATC 3707
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || ||| |||| || | |||||| || || ||
Sbjct 3288 TCCTTCTGGATGTTGTAGTCTGCTAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAAG 3347
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| ||||| |||||||| || | | |||||||| ||||| ||| | ||
Sbjct 3348 ATCAGCCGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 3407
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | |||||| || | ||||||||||| || ||||| || ||||||
Sbjct 3408 TCAATGGTGTCAGAGCTTTCGACTTCTAGGGTGATGGTTTTTCCCGTGAGGGTCTTCACA 3467
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 3468 AAGATCTGCAT 3478
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||| || | || ||| | || || | ||| ||||| || ||
Sbjct 2831 TTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAA 2890
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| |||| |||||| || || | | ||||||||| || ||| ||| | ||
Sbjct 2891 GATCAGCCTCTGCTGATCCGGTGGGATCCCCTCCTTGTCCTGAATTTTTGCCTTGACATT 2950
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | ||| | |||||| || | || || ||||| |||||||| ||||| ||
Sbjct 2951 GTCAATGGTATCAGAGCTTTCGACCTCGAGGGTAATCGTTTTCCCGGTGAGGGTTTTGAC 3010
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 3011 AAAGATCTGCAT 3022
>seq7849
Length=122270
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| | ||||| |||||||| |||| || || ||||| ||||||||||| | |
Sbjct 79472 CCGCCCCTCAGCCGCAGCACCAAATGTAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCC 79531
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || ||||| ||||| |||||||| || |||| ||| || || ||
Sbjct 79532 AGAGTCCGCCCATCCTCCAATTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCCGGTGGA 79591
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||| || || |||||| ||| | | | |||| ||| | || ||
Sbjct 79592 ATCCCCTCTTTATCCTGAATCTTTGCCTTCACGTTATCAATCGTATCAGAGCTCTCAACC 79651
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||| || |||||||| || ||||| |||||||| |||||
Sbjct 79652 TCGAGCGTGATTGTCTTGCCGGTTAGGGTTTTGACAAAGATTTGCAT 79698
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||| ||||| | || || ||||| ||||| ||||| |
Sbjct 81068 CCGCCGCGGAGTCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCCGCA 81127
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||| || |||||||| || || |||||||| || ||
Sbjct 81128 AGAGTGCGGCCATCCTCGAGCTGTTTTCCTGCGAAGATCAGACGCTGCTGATCCGGAGGA 81187
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || || ||||| || ||| ||||| | | | | |||| |||| |||||
Sbjct 81188 ATGCCTTCTTTGTCCTGGAT-TTTGGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCGAC 81246
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | || ||||| |||||||| || |||||||| ||||||||||||
Sbjct 81247 CTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTCACGAAGATCTGCATC 81295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322966787665760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |