Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq9252 107 2e-18 >seq9252 Length=190322 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || |||||||||||||| || ||||||||| | || ||||| || | Sbjct 60054 ATGCAGATCTTCGTGAAAACCTTAACCGGGAAGACGATAACCCTAGAGGTCGAGTCCTCC 60113 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||| |||| || ||| | ||||| ||| |||| ||||| Sbjct 60114 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAAGAGGGCATACCTCCGGACCAA 60173 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| | || | || || |||||||| ||||| | || || ||| |||| | Sbjct 60174 CAACGCCTGATCTTCGCCGGAAAACAACTAGAAGACGGCCGAACCCTGGCCGACTACAAC 60233 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || ||||| || | ||||| || | ||| ||||| | |||||||| Sbjct 60234 ATCCAGAAGGAATCAACGCTCCACCTGGTGCTACGACTTCGCGGAGG 60280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418167774204320