Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq4434 91.5 1e-13 seq7849 87.8 1e-12 >seq4434 Length=125464 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 39488 CATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAAT 39547 |||| || || |||| ||||| ||||| || | || ||| || || || ||||| | Sbjct 10248 CATC-CCACCACGCAGGCGCAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTATAGT 10306 Query 39548 CGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCG 39607 ||||||| || |||| ||||| || ||||| |||| || | | |||||| |||| Sbjct 10307 CGGCCAAGGTACGCCCATCCTCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCCG 10366 Query 39608 AGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTT 39667 || | || |||||||| || || ||| | | ||| ||||| | ||||| Sbjct 10367 GTGGAATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCTATGGTGTCGGAGCTTT 10426 Query 39668 CCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| || | || || || || || || | ||||| |||||||||||||| Sbjct 10427 CCACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 10478 >seq7849 Length=122270 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588 || || || || ||||| || || | | ||| |||| || | ||||| || | || Sbjct 81104 TCCTTCTGGATGTTATAGTCCGCAAGAGTGCGGCCATCCTCGAGCTGTTTTCCTGCGAAG 81163 Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648 || | |||||||||||||| || | |||||||||||| ||||| ||| | ||| Sbjct 81164 ATCAGACGCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGGATTTTGGCTTTGA-CGTT 81222 Query 39649 G-CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | | ||||| | ||| || || || | ||| || || || || |||| ||||| || Sbjct 81223 GTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTCAC 81282 Query 39708 GAAGATCTGCAT 39719 |||||||||||| Sbjct 81283 GAAGATCTGCAT 81294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347256474856193