Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq16707 86.0 1e-11 seq25359 84.2 3e-11 >seq16707 Length=103149 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| |||||| |||| ||||||||||| |||||| | ||||||||||| Sbjct 38242 GGATTGTAGTTCAATTGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 38300 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 38301 CCCCGTCAGTCC 38312 >seq25359 Length=1410 Score = 84.2 bits (92), Expect = 3e-11 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| | |||| |||| ||||||||||| |||||| | ||||||||||| Sbjct 1088 GGATTGTAGTTCAATCGGTC-AGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 1030 Query 169788 CCCCGTCAGTCCTGCC--ATTTT-TAAAT 169813 |||||||||||| | | ||||| ||||| Sbjct 1029 CCCCGTCAGTCCCGACGGATTTTATAAAT 1001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777372261191600