Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16]
26,721 sequences; 604,217,145 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq4434 84.2 2e-11
>seq4434
Length=125464
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || || || ||||| | || || || ||||| ||| ||| |||| ||
Sbjct 10478 ATGCAGATCTTCGTGAAAACCCTCACAGGCAAGACCATCACCCTCGAGGTGGAAAGCTCC 10419
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | || |||| || ||| |||||||||||| | || || ||
Sbjct 10418 GACACCATAGACAATGTCAAAGCCAAGATCCAGGACAAAGAGGGAATTCCACCGGACCAG 10359
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||||| || |||||||| || || || ||||| ||| || ||||||| ||||||
Sbjct 10358 CAGAGGCTGATCTTTGCAGGGAAGCAGTTGGAGGATGGGCGTACCTTGGCCGACTATAAC 10299
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762
||||| || ||||| || || ||| ||||
Sbjct 10298 ATTCAGAAGGAATCGACCCTTCACTTGGT 10270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425266261742259
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |