Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq26701 87.8 3e-12 >seq26701 Length=70828 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || |||||||| || ||| |||| || ||| ||| Sbjct 32961 ATGCAGATTTTTGTCAAGACCCTCACAGGAAAAACAATAACACTAGAGGTAGAAAGCTCT 33020 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || ||||| || || || || || || || ||||| || Sbjct 33021 GATACCATTGACAATGTCAAGGCAAAAATTCAGGACAAGGAGGGGATCCCACCAGATCAG 33080 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | ||| || ||||||||||| ||| | |||| | |||||||||| Sbjct 33081 CAGAGGCTGATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGAACCCTTGCAGATTATAAC 33140 Query 156003 ATATCCAAAGAGGCGACGCTTCA 156025 || || ||| | || ||||| Sbjct 33141 ATCCAGAAGGAGTCAACCCTTCA 33163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731627545603600