Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2938 86.0 1e-11 >seq2938 Length=28785 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || || || | || | ||| || ||| |||||||| Sbjct 10958 ATACCACCACGCAGACGGAGCACCAAGTGCAGGGTCGACTCCTTCTGAATGTTATAATCA 10899 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | ||| | || ||||| || || ||||||||||| |||||||| ||||| ||| Sbjct 10898 GCCAGGGTGCGTCCATCCTCCAACTGCTTCCCAGCAAAAATCAATCTCTGCTGGTCCGGT 10839 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| || || ||||| || || || ||||| || || || || || Sbjct 10838 GGGATTCCCTCCTTGTCTTGGATCTTCGCCTTAACATTGTCAATGGTGTCCGAGCTCTCA 10779 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||| || || || || | || || | || |||||||| Sbjct 10778 ACCTCCAGGGTAATTGTCTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 10729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904833673261800