Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq22277 96.9 3e-15 seq5804 91.5 1e-13 >seq22277 Length=3790 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331 ||||| || ||||||||||| | ||||| ||||| |||||| |||| || | || Sbjct 1760 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAAACGATTACCCTCGAGGTCGAAAGCTCT 1819 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | | || || || ||| ||||| || || | || |||||| Sbjct 1820 -GATACCATCGACAATGTCAAGGCAAAAATTCAGGACAAGGAGGGGATCCCACCGGATCA 1878 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || || || | ||| || |||||||||||||||| | | || | ||||||||||| Sbjct 1879 GCAGAGGCTGATCTTTGCCGGCAAACAGCTGGAGGATGGCCGCACCCTCGCGGATTACAA 1938 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||| || || ||||| || | ||| |||| Sbjct 1939 CATCCAGAAGGAATCGACCCTCCACTTGGT 1968 >seq5804 Length=153150 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||| | |||||||| ||||| ||| |||| |||| | Sbjct 32334 ATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGAGCTCC 32393 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||| ||||| || || | || |||||| Sbjct 32394 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCAG 32453 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | ||| || || ||||| ||||| | | |||| | || || |||||| Sbjct 32454 CAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCGCCGACTACAAC 32513 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| |||||||| || | ||| ||||| Sbjct 32514 ATTCAGAAAGAATCCACCCTCCACCTGGTG 32543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412707153101453