Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq7849 98.7 9e-16 >seq7849 Length=122270 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||| || || || |||||||| || | |||||| ||| |||||||| || |||| Sbjct 79959 TTGATTCCTTCTGTATGTTGTAATCAGCGAGGGTACGGCCATCCTCGAGCTGCTTTCCGG 80018 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| |||||||||||||| ||||| || ||||| || || || || |||| Sbjct 80019 CGAAGATCAGACGCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGGATCTTCGCCTTCA 80078 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | || |||| ||| || |||| ||| | ||||| ||||| || |||| Sbjct 80079 CGTTATCAATTGTGTCGGAGCTCTCAACCTCGAGCGTGATTGTTTTCCCAGTTAGGGTTT 80138 Query 132108 TTATGAAAATCTGCATG 132124 ||| ||| ||||||||| Sbjct 80139 TTACGAAGATCTGCATG 80155 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATG-GTACGCGAATCTTCGAGCTGTTTACCGGA 131988 ||||| ||||| ||||||||||| | || | ||||| || ||||||||||| |||| Sbjct 80189 GACTCCTTTTGGATGTTGTAGTC-CGCAAGAGTACGGCCGTCCTCGAGCTGTTTTCCGGC 80247 Query 131989 ATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAA 132048 |||| || ||||| ||||| ||||| || ||||| || || |||||| || | Sbjct 80248 GAAGATCAGGCGCTGCTGATCCGGAGGAATACCTTCCTTGTCTTGAATTTTGGCCTTGAC 80307 Query 132049 CTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | || | ||||| | ||| || |||| ||| | || || ||||| || ||||| Sbjct 80308 ATTATCAATTGTATCTGAGCTCTCGACCTCGAGCGTGATTGTCTTGCCAGTTAGGGTTTT 80367 Query 132109 TATGAAAATCTGCATG 132124 || ||| ||||||||| Sbjct 80368 TACGAAGATCTGCATG 80383 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATG-GTACGCGAATCTTCGAGCTGTTTACCGGA 131988 ||||| || || ||||| ||||| | || | || || ||| ||||||||||| || | Sbjct 81101 GACTCCTTCTGGATGTTATAGTC-CGCAAGAGTGCGGCCATCCTCGAGCTGTTTTCCTGC 81159 Query 131989 ATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAA 132048 |||| |||||||| ||||| ||||| ||||||||||| || ||||| ||| | Sbjct 81160 GAAGATCAGACGCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGGATTTTGGCTTTGAC 81219 Query 132049 CTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | || | || |||| ||| || |||| || | || || || || || ||||| Sbjct 81220 GTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTT 81279 Query 132109 TATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 81280 CACGAAGATCTGCAT 81294 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||||||||| | ||||||| || || ||||||||||| || || ||| | Sbjct 79484 CGCAGCACCAAATGTAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCCAGAGTCCGCCCA 79543 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || | || || || | |||| || | ||||||||| || || || || |||||| Sbjct 79544 TCCTCCAATTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCCGGTGGAATCCCCTCTTTA 79603 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| ||| |||| | || | ||||| | ||| || |||| ||| | Sbjct 79604 TCCTGAATCTTTGCCTTCACGTTATCAATCGTATCAGAGCTCTCAACCTCGAGCGTGATT 79663 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || || ||||| | || || ||||| Sbjct 79664 GTCTTGCCGGTTAGGGTTTTGACAAAGATTTGCAT 79698 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||| ||||| | || || ||| ||||||||||| || | Sbjct 80417 GACTCCTTCTGGATGTTATAGTCTGCAAGAGTGCGGCCATCCTCGAGCTGTTTTCCTGCG 80476 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| ||||| ||||| || ||||| || || |||||| || | Sbjct 80477 AAGATCAGGCGCTGCTGATCCGGAGGAATACCTTCCTTGTCTTGAATTTTGGCCTTGACA 80536 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | ||| || |||| ||| | || || ||||| || |||||| Sbjct 80537 TTATCAATTGTATCTGAGCTCTCGACCTCGAGCGTGATTGTCTTGCCAGTTAGGGTTTTT 80596 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 80597 ACGAAGATCTGCATG 80611 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||| ||||| | || || ||| ||||||||||| || | Sbjct 80645 GACTCCTTCTGGATGTTATAGTCTGCAAGAGTGCGGCCATCCTCGAGCTGTTTTCCTGCG 80704 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| ||||| ||||| || ||||| || || |||||| || | Sbjct 80705 AAGATCAGGCGCTGCTGATCCGGAGGAATACCTTCCTTGTCTTGAATTTTGGCCTTGACA 80764 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | ||| || |||| ||| | || || ||||| || |||||| Sbjct 80765 TTATCAATTGTATCTGAGCTCTCGACCTCGAGCGTGATTGTCTTGCCAGTTAGGGTTTTT 80824 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 80825 ACGAAGATCTGCATG 80839 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||| ||||| | || || ||| ||||||||||| || | Sbjct 80873 GACTCCTTCTGGATGTTATAGTCTGCAAGAGTGCGGCCATCCTCGAGCTGTTTTCCTGCG 80932 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| ||||| ||||| || ||||| || || |||||| || | Sbjct 80933 AAGATCAGGCGCTGCTGATCCGGAGGAATACCTTCCTTGTCTTGAATTTTGGCCTTGACA 80992 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | ||| || |||| ||| | || || ||||| || |||||| Sbjct 80993 TTATCAATTGTATCTGAGCTCTCGACCTCGAGCGTGATTGTCTTGCCAGTTAGGGTTTTT 81052 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 81053 ACGAAGATCTGCATG 81067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476452005901560