Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16] 26,721 sequences; 604,217,145 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq15657 89.7 4e-13 seq15652 84.2 2e-11 >seq15657 Length=83188 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | || || | ||||| ||||||||||||||| Sbjct 66061 TGAGCAATCATGCATGTCAATAGGGCATAAGATGCGATGTTAAATGGAACACCCAGACCC 66002 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || || | ||| |||| ||| || || | ||||||| |||||||||||||| Sbjct 66001 ATGTCAGCAGAGCGCTGATACATTTGACATGATAATTCCCCGTCGGCAACATAAAACTG 65943 >seq15652 Length=12745 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAA-CTGTAGCTGGCTACATTAAAAGGAACACCCAGACC 118604 |||||||||||| ||||||| | | || || | | ||||| |||||||||||||| Sbjct 752 TGAGCAATCATGCATGTCAATAGGGCACAAGATG-CGATGTTAAATGGAACACCCAGACC 694 Query 118605 CATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 |||||| || || | ||| |||| ||| || || | | |||| | |||||||||||||| Sbjct 693 CATGTCAGCAGAGCGCTGATACATTTGACATGATAACACCCCATCGGCAACATAAAACTG 634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414341820578644