Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Actinidia_20chinensis_20[genbank_20GCA_5F000467755.1_202013-09-16]
26,721 sequences; 604,217,145 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq21627 120 2e-22
seq22277 116 3e-21
seq17719 109 4e-19
seq7849 107 1e-18
seq26701 104 2e-17
seq19262 96.9 2e-15
seq19972 95.1 8e-15
seq8351 95.1 8e-15
seq4573 91.5 1e-13
seq12303 84.2 1e-11
seq4434 84.2 1e-11
seq2938 84.2 1e-11
>seq21627
Length=4779
Score = 120 bits (132), Expect = 2e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || |||||||| ||||| ||||| | |
Sbjct 3706 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTTGAAAGCTCC 3647
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || |||| | | ||||||||||| | || || || ||
Sbjct 3646 GACACCATTGACAATGTCAAGGCAAAGA-TCCAGGACAAAGAAGGAATCCCACCGGACCA 3588
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| || | || |||||||| || || ||||| |||| || ||||||| ||| |||||
Sbjct 3587 GCAACGGCTGATCTTTGCCGGAAAGCAGCTGGAGGACGGCCGGACTTTAGCCGACTACAA 3528
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 3527 CATCCAGAAGGAGTCGAC 3510
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||||||||| || |||||||| || ||||| || || | |
Sbjct 3022 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAAACGATTACCCTCGAGGTCGAAAGCTCT 2963
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || |||||| || ||||| || || | || || |||||
Sbjct 2962 GATACCATTGACAATGTCAAGGCAAAAA-TTCAGGACAAGGAGGGGATCCCACCGGATCA 2904
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||||||||| || || || | ||||| | | ||||||||
Sbjct 2903 GCAGAGGCTGATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCCTCGCGGATTACAA 2844
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| || || || || || | || || |||
Sbjct 2843 CATCCAGAAGGAATCGACCCTCCACTTGGTT 2813
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||||||||||||||| ||||| || ||||| || | |
Sbjct 3478 ATGCAGATCTTTGTGAAGACCCTCACGGGAAAAACCATCACCCTAGAAGTCGAAAGCTCT 3419
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || ||||| ||||| | || || || ||
Sbjct 3418 GACACCATTGATAATGTCAAGGC-CAAGATCCAGGACAAGGAAGGAATCCCACCGGACCA 3360
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| || | || |||||||| || || || || |||| ||||| ||| || |||||
Sbjct 3359 GCAACGGCTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTAGCAGACTACAA 3300
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 3299 CATCCAGAAGGAGTCGAC 3282
>seq22277
Length=3790
Score = 116 bits (128), Expect = 3e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||| ||||| ||||| | |
Sbjct 1076 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAAAGCTCC 1135
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || |||| | | ||||||||||| | || || || ||
Sbjct 1136 GACACCATTGACAATGTCAAGGCAAAGA-TCCAGGACAAAGAAGGAATCCCACCGGACCA 1194
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| || | || |||||||| || || ||||| |||| || ||||||| ||| |||||
Sbjct 1195 GCAACGGCTGATCTTTGCCGGAAAGCAGCTGGAGGACGGCCGGACTTTAGCCGACTACAA 1254
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 1255 CATCCAGAAGGAGTCGAC 1272
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||||||||| || |||||||| || ||||| || || | |
Sbjct 1760 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAAACGATTACCCTCGAGGTCGAAAGCTCT 1819
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || | || ||| | || |||||| || ||||| || || | || || |||||
Sbjct 1820 GATACCATCGACAATGTCAAGGCAAAAA-TTCAGGACAAGGAGGGGATCCCACCGGATCA 1878
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||||||||| ||||| || | ||||| | | ||||||||
Sbjct 1879 GCAGAGGCTGATCTTTGCCGGCAAACAGCTGGAGGATGGCCGCACCCTCGCGGATTACAA 1938
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| || || || || || | || || |||
Sbjct 1939 CATCCAGAAGGAATCGACCCTCCACTTGGTT 1969
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||||||||||||||| ||||| || ||||| || | |
Sbjct 1304 ATGCAGATCTTTGTGAAGACCCTCACGGGAAAAACCATCACCCTAGAAGTCGAAAGCTCT 1363
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || ||||| ||||| | || || || ||
Sbjct 1364 GACACCATTGATAATGTCAAGGC-CAAGATCCAGGACAAGGAAGGAATCCCACCGGACCA 1422
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| || | || |||||||| || || || || |||| ||||| ||| || |||||
Sbjct 1423 GCAACGGCTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTAGCAGACTACAA 1482
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 1483 CATCCAGAAGGAGTCGAC 1500
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||||||||| || |||||||| ||||| || || | |
Sbjct 1532 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTCGAAAGCTCT 1591
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||| ||| | || | || || ||||| ||||| | || || || ||
Sbjct 1592 GACACTATTGATAATGTCAAGGC-CAAGATCCAGGACAAGGAAGGAATCCCACCGGACCA 1650
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || || || || ||||| || || |||| ||||| | | || |||||
Sbjct 1651 GCAGAGGCTGATCTTCGCTGGAAAACAGCTTGAGGACGGCCGCACGCTGGCGGACTACAA 1710
Query 23790 CATACAAAAAGAGTCCAC 23807
||||| || || || ||
Sbjct 1711 TATACAGAAGGAATCAAC 1728
>seq17719
Length=101630
Score = 109 bits (120), Expect = 4e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| |||||||| ||||| || || || || ||||| || || |||
Sbjct 79226 AAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTCGAGGTCGAGTCC 79285
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||||||| | || | | || || || ||||| || || | ||||| ||
Sbjct 79286 TCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 79345
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| | || || ||||| || || || || |||| || ||||| | |||||||
Sbjct 79346 CAGCAGCGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCCGATTAC 79405
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || || ||||| ||
Sbjct 79406 AACATCCAGAAGGAGTCGAC 79425
>seq7849
Length=122270
Score = 107 bits (118), Expect = 1e-18
Identities = 143/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| || || || ||||| || ||||| || |||||||| || ||||| | |
Sbjct 79927 AATGCAGATCTTTGTAAAGACCCTAACTGGAAAGACAATCACTCTTGAGGTTGAGAGCTC 79868
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| | | ||| || || ||||| |||||| | || || |||||
Sbjct 79867 TGATACAATTGATAATGTGAAAGTGAAGATCCAAGACAAGGAAGGTATTCCTCCGGATCA 79808
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || |||||||| || || |||| || | || ||| | | |||||||||
Sbjct 79807 ACAGCGTCTGATCTTTGCCGGAAAGCAGTTGGAGGATGGCCGTACTCTTGCCGATTACAA 79748
Query 23790 CATACAAAAAGAGTCCACA 23808
||| || || || || |||
Sbjct 79747 CATCCAGAAGGAATCAACA 79729
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| |||||||| || || ||||| ||||| ||||| ||||| | |
Sbjct 80154 ATGCAGATCTTCGTAAAAACCCTAACTGGGAAAACAATCACGCTCGAGGTTGAGAGCTCC 80095
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || ||||| |||||| | || || ||||||
Sbjct 80094 GACACAATTGATAACGTGAAGGCGAAGATCCAAGACAAGGAAGGTATTCCTCCTGATCAA 80035
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || ||||| || || || || || | || || | | |||||||||
Sbjct 80034 CAGCGTCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACCCTCGCTGATTACAAC 79975
Query 23791 ATACAAAAAGAGTCCAC 23807
||||| || || || ||
Sbjct 79974 ATACAGAAGGAATCAAC 79958
Score = 98.7 bits (108), Expect = 7e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| |||||||| || || || || || |||||||| || || | |
Sbjct 81294 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATAACTCTCGAGGTCGAGAGCTCC 81235
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | ||| ||||| ||||||||||| | || || |||||
Sbjct 81234 GACACGATCGACAACGTCAAAGCCAAAATCCAGGACAAAGAAGGCATTCCTCCGGATCAG 81175
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || || || || ||||| || || || | |||||| | | || || |||
Sbjct 81174 CAGCGTCTGATCTTCGCAGGAAAACAGCTCGAGGATGGCCGCACTCTTGCGGACTATAAC 81115
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 81114 ATCCAGAAGGAGTCCAC 81098
>seq26701
Length=70828
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| |||||||| || || || ||||| ||||| || || | |
Sbjct 32505 ATGCAGATCTTCGTTAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTGGAAAGCTCC 32564
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | || ||||| ||||| | || || || ||
Sbjct 32565 GACACCATTGACAATGTCAAGGCCAAGA-TTCAAGACAAGGAAGGGATCCCACCGGACCA 32623
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || || ||||||||||| ||||| || | ||||| ||| || |||||
Sbjct 32624 GCAGAGGCTGATCTTCGCCGGCAAACAGCTGGAGGATGGCCGCACCCTAGCAGACTACAA 32683
Query 23790 CATACAAAAAGAGTCCACATTACA 23813
|||||| || || || || ||||
Sbjct 32684 CATACAGAAGGAATCGACCCTACA 32707
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| |||||||| || || || ||||| ||||| || || | |
Sbjct 32049 ATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 32108
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || |||| | | ||||||||||| | || ||||| ||
Sbjct 32109 GACACCATCGATAATGTCAAGGCAAAGA-TCCAGGACAAAGAAGGCATCCCACCAGACCA 32167
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| | | || ||||| || || || || || |||| ||||| ||| || |||||
Sbjct 32168 GCAAAGGCTGATCTTTGCTGGAAAGCAGCTCGAGGACGGCCGCACCCTAGCAGACTACAA 32227
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 32228 CATCCAGAAGGAGTCTAC 32245
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || |||||||| |||||||| || || || || || || | |
Sbjct 32961 ATGCAGATTTTTGTCAAGACCCTCACAGGAAAAACAATAACACTAGAGGTAGAAAGCTCT 33020
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | ||||||| ||||| || || | || ||||||||
Sbjct 33021 GATACCATTGACAATGTCAAGGC-AAAAATTCAGGACAAGGAGGGGATCCCACCAGATCA 33079
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| || || || || || || | || || | | ||||| ||
Sbjct 33080 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGAACCCTTGCAGATTATAA 33139
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 33140 CATCCAGAAGGAGTCAAC 33157
>seq19262
Length=114341
Score = 96.9 bits (106), Expect = 2e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| |||||| | ||||| ||||||||| | || || ||||||||||||||| |||||
Sbjct 46652 GACAAGGAAGGTATCCCGCCTGATCAACAGAGGTTGATTTTTGCCGGCAAACAATTGGAA 46593
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
|| | || ||| | | || |||||||| || || ||||| ||| | || | |||||
Sbjct 46592 GATGGCCGAACTCTGGCAGACTACAACATCCAGAAGGAGTCAACACTTCACCTGGTTTTG 46533
Query 23824 AGG 23826
|||
Sbjct 46532 AGG 46530
>seq19972
Length=4408
Score = 95.1 bits (104), Expect = 8e-15
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| |||||||| ||||| || || || || ||||| || || |||
Sbjct 3808 AAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTCGAGGTCGAGTCC 3867
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||||||| | || | | || || || ||||| || || | || || ||
Sbjct 3868 TCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGAC 3927
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| | || || ||||| || || || || |||| || ||||| | || |||
Sbjct 3928 CAGCAGCGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCGGACTAC 3987
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || || ||||| ||
Sbjct 3988 AACATCCAGAAGGAGTCGAC 4007
>seq8351
Length=11701
Score = 95.1 bits (104), Expect = 8e-15
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| |||||||| ||||| || || || || ||||| || || |||
Sbjct 2652 AAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCCTCGAGGTCGAGTCC 2711
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||||||| | || | | || || || ||||| || || | || || ||
Sbjct 2712 TCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGAC 2771
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||||| | || || ||||| || || || || |||| || ||||| | || |||
Sbjct 2772 CAGCAGCGGCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTTTGGCGGACTAC 2831
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || || ||||| ||
Sbjct 2832 AACATCCAGAAGGAGTCGAC 2851
>seq4573
Length=120409
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763
||||| |||||| | || || ||||||||| | || |||||||||||||||||| |||||
Sbjct 7900 GACAAGGAAGGTATCCCACCTGATCAACAGAGGTTGATATTTGCCGGCAAACAATTGGAA 7959
Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
|| | || ||| | | || ||||| || || || ||||| ||| | || | |||||
Sbjct 7960 GATGGCCGAACTCTGGCAGACTACAATATCCAGAAGGAGTCAACACTTCACCTGGTTTTG 8019
Query 23824 AGG 23826
|||
Sbjct 8020 AGG 8022
>seq12303
Length=64598
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 23596 AATTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTC 23655
|||| ||| || | |||||||| ||||| || ||||| || || ||||| |||||||||
Sbjct 11067 AATTGATTCCTACAGATGCAGATCTTCGTGAAGACCCTTACCGGCAAAACCATCACTCTC 11008
Query 23656 GAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGG 23714
|| || || | | ||||| | || ||| | || | ||| ||| || || || ||
Sbjct 11007 GAGGTGGAGAGCTCCGACACCATCGATAATGTCAAGGC-AAAGATTCAAGATAAGGAGGG 10949
Query 23715 TGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC 23774
| | || || || || ||| | || || ||||| || || || |||| || | || ||
Sbjct 10948 TATCCCACCGGACCAGCAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAGGATGGGCGTAC 10889
Query 23775 TTTAGGCGATTACAACATACAAAAAGAGTCCAC 23807
|| | ||| || ||||| || || || || ||
Sbjct 10888 CTTGGCCGACTATAACATTCAGAAGGAATCGAC 10856
>seq4434
Length=125464
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || | || || || || ||||| | ||||| || | ||
Sbjct 10250 ATGCAGATTTTTGTCAAGACTTTGACCGGGAAGACCATCACCTTGGAAGTGGAGAGCTCG 10191
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || ||| || || || | ||||| |||||
Sbjct 10190 GACACCATTGATAATGTGAAGGC-TAAGATCCATGATAAGGAGGGCATTCCGCCGGATCA 10132
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | |||| || || || || || ||||| |||| | | ||||||| || |||||
Sbjct 10131 GCAGAGGCTAATCTTCGCTGGGAAGCAGCTGGAGGACGGAAGGACTTTAGCTGACTACAA 10072
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 10071 CATTCAGAAGGAGTCAAC 10054
>seq2938
Length=28785
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || |||||||| || || || || || || || ||||| | ||
Sbjct 10729 ATGCAGATTTTTGTCAAGACCCTCACCGGCAAGACAATTACCCTGGAGGTTGAGAGCTCG 10788
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| |||| | || || ||||| || || | || || || ||
Sbjct 10789 GACACCATTGACAATGTTAAGGC-GAAGATCCAAGACAAGGAGGGAATCCCACCGGACCA 10847
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| || || || |||| || | |||||| | | ||||| ||
Sbjct 10848 GCAGAGATTGATTTTTGCTGGGAAGCAGTTGGAGGATGGACGCACCCTGGCTGATTATAA 10907
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 10908 CATTCAGAAGGAGTCGAC 10925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337899523054268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |