Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq14462 134 1e-26
>seq14462
Length=746139
Score = 134 bits (148), Expect = 1e-26
Identities = 241/348 (69%), Gaps = 8/348 (2%)
Strand=Plus/Minus
Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293
|||||| ||||| ||||| | |||||||| | ||||||||||| || || || ||
Sbjct 137939 ACAAGCGAAATCGCAATGGAGGCCTTCGTCTCGTGAGATTAACTCGTTGGAGAAGGTGAG 137880
Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATAT--AGCGGCAAATGAACCAGAAAAG 16351
|| ||||| || ||||||||||||| ||| || || ||| | || | ||| || |||
Sbjct 137879 TCCAGGCATGAGACCTCGTTTTTTAAGCCAGAAAATGGAGCAGAAACT--ACCGGAGAAG 137822
Query 16352 AATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactt 16411
|| ||||||||||| ||| || || || | ||||| | | ||| | | |
Sbjct 137821 AAGATACCTTCAACGCAGGCGAAGGCTACGATACGCTCCGCAAAGGTTTGAGAT---CCG 137765
Query 16412 tctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCA 16471
|| ||||| | | ||||| | ||||| | |||||| || | || |||||
Sbjct 137764 TCGATCCAAGTCATCGCCCATTGCGCTTTCTTGGCAACACACGGGATTGTTTCGATTGCG 137705
Query 16472 TTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATAC 16531
||| | || | | |||||||| | || || || ||||| | |||| |||||||
Sbjct 137704 CGAAAGAGATGGTCTCTTTCTTTGTTGTCCTTGATGTAGGTATCAAGAAGTAGACTATAC 137645
Query 16532 ATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAGCA 16578
|| || |||||||||||||| || || || ||||| || || ||||||
Sbjct 137644 ATCTCCGAATGAATATTCTCAATCGCGATTTGAAATCCGTAGAAAGCA 137597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462406131003200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |