Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq12648 89.7 4e-13 seq15310 87.8 1e-12 >seq12648 Length=147898 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || || || ||||| ||| |||| | || ||||||||||||||||| |||||||||||| Sbjct 12759 CAGTTCTATGTTGCGAATGGTGAACTTTCATGTCAAATGTATCAACGGTCCGCTGATATG 12818 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || || || || || || |||||| ||| | || || || | ||| |||| ||| Sbjct 12819 GGTCTCGGCGTGCCGTTTAACATTGCATCTTACTCTCTTCTGACATGTATACTTGCTCAT 12878 Query 20551 GT 20552 || Sbjct 12879 GT 12880 >seq15310 Length=176306 Score = 87.8 bits (96), Expect = 1e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || ||||||||||||||||| || || ||||||||||| ||||| |||||||| |||||| Sbjct 56673 TCATGTCAAATGTATCAACGTTCAGCAGATATGGGACTTGGTGTACCTTTCAACATTGCA 56732 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||| | || ||||| | | | | || |||||| Sbjct 56733 TCTTATTCTCTTCTTACATGTTTACTAGCTCATGTT 56768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399094911112840