Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq16577 84.2 2e-11
>seq16577
Length=433012
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || || |||||| |||| || ||||||||||| | || ||||||||
Sbjct 33853 ATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACGATAACTCTTGAAGTCGAATCATCA 33794
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|| | | || | ||| || | || ||| | |||||||| | || || |||
Sbjct 33793 GATACAATCGACAATGTCAAAGCCAAGATTCAGGATAAAGAAGGAATTCCACCGGATCAG 33734
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|||||||| || | || || |||||||| ||||| ||| | |||||||| |
Sbjct 33733 CAACGTTTGATTTTCGCTGGAAAACAACTCGAAGACGGTCGTACTCTTGCCGATTACAAC 33674
Query 25012 ATACAGAAAGAGGCCACGCTTCAT 25035
|| ||||| || | |||||||||
Sbjct 33673 ATCCAGAAGGAATCGACGCTTCAT 33650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418210643959040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |