Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq14462 176 7e-39
>seq14462
Length=746139
Score = 176 bits (194), Expect = 7e-39
Identities = 382/559 (68%), Gaps = 16/559 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||||| |||||||| ||||| |||| || |||||||| | ||| || ||||||||
Sbjct 137388 ATCTGGGAGATGTACAAGAAGGCCGAGGCGTCGTTTTGGACTGCCGAGGAAGTCGATCTA 137447
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| ||||||||||| ||| | || || ||| | || || |
Sbjct 137448 TCACAGGACGGACGCGATTGGGAGA---ATTTAAACGACGGCGAACGACACTTCATCAAG 137504
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| | || |||||||| |||| ||| ||||| |||||| || ||||| | |||
Sbjct 137505 CATGTCTTAGCCTTCTTCGCCGCCTCTGATGGCATCGTCTTGGAGAATCTTGCATCTCGA 137564
Query 125199 TTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT-TACGGATTCCAAATCATGA 125256
||| | || ||| | | | |||| | |||||||| |||||||| |||||| ||
Sbjct 137565 TTCATGTCCGATGTTCA-GGTATCGGAGGCG-CGTGCTTTCTACGGATTTCAAATCGCGA 137622
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGC 125316
||||||| | || ||||| ||||| | ||| |||| | |||| || | | |
Sbjct 137623 TTGAGAATATTCATTCGGAGATGTATAGTCTACTTCTTGATACCTACA-TCAAGGACAAC 137681
Query 125317 AACGTAA-ACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
|| | || | || |||||| ||||||||| || | |||| | | || || ||
Sbjct 137682 AAAGAAAGAGACCATCTCTTTCGCGCAATCGAAACAATCCCGTGTGTTGCCAAGAAAGCG 137741
Query 125376 CAATGGGTGATTCGGTGGATCGA-TGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
||||||| ||| |||||||| || ||| ||| || || | | || ||
Sbjct 137742 CAATGGGCGATGACTTGGATCGACGGATCTCAAACCTT----TGCGGAGCGTATCGTAGC 137797
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTTTGGCTCA 125493
|||||| ||| || || |||||||| || |||||||| ||| |||| || ||||| |
Sbjct 137798 CTTCGCCTGCGTTGAAGGTATCTTCTTCTCCGGTAGTTTCTGC-TCCATTTTCTGGCTTA 137856
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
| || || || |||||||| ||||| || | |||||||| || || |||||||| |
Sbjct 137857 AAAAACGAGGTCTCATGCCTGGACTCACCTTCTCCAACGAGTTAATCTCACGAGACGAAG 137916
Query 125554 GCCTACACTGTGACTTTGC 125572
|||| || || || || ||
Sbjct 137917 GCCTCCATTGCGATTTCGC 137935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740889571549120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |