Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq16938 84.2 2e-11 >seq16938 Length=276168 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| |||| |||| | |||||| || | ||| || ||||||||||| || ||| Sbjct 257017 TTGATCATGGTTCCACCTCTAAGCCTCAAGACTAGATGAAGAGTAGATTCTTTCTGGATG 257076 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 ||||||||| | | ||| | |||||| | ||| || || ||| | || || |||||| Sbjct 257077 TTGTAATCGGCAAGTGTTCTGCCATCTTCTAGTTGCTTACCGGCAAAGATGAGTCTCTGT 257136 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| || | || |||||||| Sbjct 257137 TGATCAGGTGGTATACCCTCTTTGTC 257162 Score = 82.4 bits (90), Expect = 6e-11 Identities = 107/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 19970 TTTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTAT 20028 ||| ||||| |||| |||| | |||||| || | ||| || ||||| ||||| || || Sbjct 249804 TTTGATCATGGTTCCACCTCTAAGCCTCAAGACTAGATGAAGAGTAGACTCTTTCTGGAT 249745 Query 20029 GTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTG 20088 ||||||||| | | ||| | |||||| | ||| || |||||| | || || ||||| Sbjct 249744 GTTGTAATCCGCAAGTGTTCTTCCATCTTCTAGTTGCTTACCCGCAAAGATGAGTCTCTG 249685 Query 20089 TTGATCGACGGGCACGCCTTCTTTGTC 20115 |||||| || | || |||||||| Sbjct 249684 TTGATCAGGTGGTATACCCTCTTTGTC 249658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419493557577672