Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq14462 93.3 4e-14 >seq14462 Length=746139 Score = 93.3 bits (102), Expect = 4e-14 Identities = 181/265 (68%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 ||||||||| || ||||| ||||| || ||||| || ||||||||||| ||| | || Sbjct 137651 ACTATACATCTCCGAATGAATATTCTCAATCGCGATTTGAAATCCGTAGAAAGCACGCGC 137592 Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAG-TTTTCATTTACTATTCCAT 21884 ||| || ||||| ||||| ||||| || |||| || || || || |||| Sbjct 137591 CTCCGATACCTGAACATCGGACATGAATCG-AGATGCAAGATTCTCCAAGACGATGCCAT 137533 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATT 21944 || |||||| || || || || | || || || || | ||||||| || |||| | Sbjct 137532 CAGAGGCGGCGAAGAAGGCTAAGACATGCTTGATGAAGTGTCGTTCGCCGTCGTTTAAAT 137473 Query 21945 TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAA 22004 | | |||||| | || | ||||| ||| ||||| || | |||||||| || Sbjct 137472 TCTCCCAATCGCGTCCGTCCTGTGATAGATCGACTTCCTCGGCAGTCCAAAACGACGCCT 137413 Query 22005 TAGCCTTTTTATACATAATCCAGAT 22029 ||||| || ||||| |||||| Sbjct 137412 CGGCCTTCTTGTACATCTCCCAGAT 137388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531779047906880