Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq14462 93.3 4e-14
>seq14462
Length=746139
Score = 93.3 bits (102), Expect = 4e-14
Identities = 181/265 (68%), Gaps = 2/265 (1%)
Strand=Plus/Minus
Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825
||||||||| || ||||| ||||| || ||||| || ||||||||||| ||| | ||
Sbjct 137651 ACTATACATCTCCGAATGAATATTCTCAATCGCGATTTGAAATCCGTAGAAAGCACGCGC 137592
Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAG-TTTTCATTTACTATTCCAT 21884
||| || ||||| ||||| ||||| || |||| || || || || ||||
Sbjct 137591 CTCCGATACCTGAACATCGGACATGAATCG-AGATGCAAGATTCTCCAAGACGATGCCAT 137533
Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATT 21944
|| |||||| || || || || | || || || || | ||||||| || |||| |
Sbjct 137532 CAGAGGCGGCGAAGAAGGCTAAGACATGCTTGATGAAGTGTCGTTCGCCGTCGTTTAAAT 137473
Query 21945 TTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAA 22004
| | |||||| | || | ||||| ||| ||||| || | |||||||| ||
Sbjct 137472 TCTCCCAATCGCGTCCGTCCTGTGATAGATCGACTTCCTCGGCAGTCCAAAACGACGCCT 137413
Query 22005 TAGCCTTTTTATACATAATCCAGAT 22029
||||| || ||||| ||||||
Sbjct 137412 CGGCCTTCTTGTACATCTCCCAGAT 137388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531779047906880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |