Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq14413 86.0 5e-12
seq16938 84.2 2e-11
>seq14413
Length=739167
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||| || || || || || |||||||| || | || ||| |
Sbjct 402852 ATGCAAATTTTTGTAAAGACCCTTACCGGCAAAACCATCACTTTAGAGGTTGAGAGTTCC 402793
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| || ||||| || ||| || || || |||||||| |||| || ||
Sbjct 402792 GACACCATT-GACAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATCCCTCCAGACCA 402734
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| |||||||| | ||| || ||||| ||||||||| | ||| | || || || ||
Sbjct 402733 GCAGAGACTTATCTTTGCCGGTAAACAGCTAGAAGATGGCCGTACCCTTGCTGACTACAA 402674
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495
||| ||||| ||||| || | ||| | |||
Sbjct 402673 CATCCAAAAGGAGTCCACACTCCATCTTGTG 402643
>seq16938
Length=276168
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 115399 TGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGA 115458
|||||| || ||||| || | |||||| || ||| ||||||||| | ||| | || ||
Sbjct 249678 TGATCAACAGAGACTCATCTTTGCGGGTAAGCAACTAGAAGATGGAAGAACACTTGCGGA 249737
Query 115459 TTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
||| ||||| || |||||||||||| | ||| | || ||||| | |||| ||||
Sbjct 249738 TTACAACATCCAGAAAGAGTCTACTCTTCATCTAGTCTTGAGGCTTAGAGGTGGAA 249793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425249072789440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |