Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq12257 95.1 1e-14 >seq12257 Length=1143886 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/241 (69%), Gaps = 18/241 (7%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||||||||||| || || |||| |||||||| |||||||| ||||||||||| || Sbjct 1016192 ACCTCCTCTCAAACGGAGAACCAAGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCCGC 1016251 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || |||| ||||||||||| ||||| || |||| || ||||||||| || Sbjct 1016252 GAGAGTTCTACCGTCCTCCAATTGCTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGG 1016311 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC--- 34076 | || || |||||| | | || |||| ||||| |||| | | || Sbjct 1016312 GATGCCTTCCTTGTCC-TGGATCTTGGCTT--------TCACATTATCGATCGTATCAGA 1016362 Query 34077 GCATTCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTT 34130 | |||| ||| || ||||| || || ||||| |||||||| || || ||||| || Sbjct 1016363 GGATTCAACCTCTAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAAATCTGCATCTT 1016422 Query 34131 T 34131 | Sbjct 1016423 T 1016423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396973784606224