Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq16023 107 2e-18 seq14413 107 2e-18 seq16726 104 3e-17 seq17130 102 9e-17 seq14499 100 3e-16 >seq16023 Length=121467 Score = 107 bits (118), Expect = 2e-18 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | |||| |||||||||||| ||||| ||||| || || || | || || Sbjct 24405 ACCAAGTGGAGTGTGGACTCCTTTTGAATGTTGTAGTCAGCGAGGGTGCGACCATCCTCA 24464 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| |||||||| ||||| ||||||||||| | || | | ||||||||| | Sbjct 24465 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 24524 Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 || || || | ||| | | | ||||| |||| ||||| |||| || ||||| Sbjct 24525 ATCTTGGCCTTCA-CGTTGTCTATGGTGTCAGAGCTC---TCCACTTCGAGGGTAATGGT 24580 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || | ||||| ||||| || ||||| Sbjct 24581 CTTACCGGTCAAGGTCTTAACAAAAATCTGCAT 24613 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || | || |||||| ||||| || | || |||||| || || ||||||||||| Sbjct 25070 ACCACCACGTAGACGCAAGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 25129 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || |||||||| || || || || | | ||||||||| | || Sbjct 25130 TAGAGTACGACCATCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGGGG 25189 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | |||||||| | || | |||| || | ||| | | | || ||| ||||| Sbjct 25190 GATTCCCTCCTTGT-CTTGGATCTTTGCTTTAACGTTGTCGATGGTATCGGAGCTTTCCA 25248 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | |||||||| |||||||| | || || || ||||||||||| Sbjct 25249 CCTCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTAACGAAGATTTGCAT 25297 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || | || ||| | |||||||| | || |||||| || || ||||| || || Sbjct 24614 ACCACCACGTAGACGAAGGACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGC 24673 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | ||| || | || || ||||||||||| ||||| ||||| || |||||||| | ||| Sbjct 24674 TAAAGTGCGACCATCCTCAAGCTGCTTACCGGCGAAGATGAGACGTTGCTGGTCCGGTGG 24733 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||| |||||| || |||| | || | ||| | | | ||||| |||| | Sbjct 24734 GATTCCCTCTTTGTCC-TGGATTTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTC---T 24789 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | |||||||||||||| || | || || || ||||| ||||| Sbjct 24790 CAACCTCAAGGGTGATGGTTTTGCCGGTCAAGGTTTTAACGAAGATCTGCAT 24841 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||| ||||||| || || |||| || || || ||||||||||| Sbjct 25334 CTCTTTCTGGATGTTGTAGTCAGCCAAGGTACGGCCGTCCTCGAGTTGTTTACCAGCGAA 25393 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | ||||||||| | || | | ||||| ||| ||| || ||||| ||| Sbjct 25394 GATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTTATCCTGGATCTTGGCTTTGA-CGT 25452 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | || || || ||||||||||| || | Sbjct 25453 TGTCGATGGTGTCGGAGCTC---TCAACCTCCAAGGTAATCGTCTTGCCCGTTAGGGTTT 25509 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||||||||| Sbjct 25510 TGACGAAGATTTGCAT 25525 >seq14413 Length=739167 Score = 107 bits (118), Expect = 2e-18 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| | ||| | |||| ||||||||| || ||||| ||||| || || || | Sbjct 402637 ACGAAGCACAAGATGGAGTGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGGCC 402696 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || |||||||| ||||| || || || |||| ||||||||| | || | | || || Sbjct 402697 ATCTTCTAGCTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGGATTCCTTCTTT 402756 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCGACCGT 42169 ||| ||| || ||||| | | | |||||| ||| || || || | || Sbjct 402757 GTCTTGGATCTTAGCTTTGACATTGTCAATGGTGTCGGAACTC---TCAACCTCTAAAGT 402813 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||||||| || || ||||||||||| |||||||| Sbjct 402814 GATGGTTTTGCCGGTAAGGGTCTTTACAAAAATTTGCAT 402852 Score = 105 bits (116), Expect = 7e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| ||||| | |||||| || | ||| ||||| || || ||||| ||||| Sbjct 402853 ACCACCTCTCAAACGAAGCACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGC 402912 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || ||||| ||||| ||||| || |||| ||||||||| | || Sbjct 402913 TAGAGTACGACCATCCTCGAGCTGTTTACCGGCGAAGATAAGTCTCTGCTGGTCCGGAGG 402972 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | ||| || || ||| | || | ||||| | | | ||||| |||| | Sbjct 402973 GATACCCTCTTTATCT-TGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---T 403028 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | ||||||||||| || || || || || |||||||||||||| Sbjct 403029 CAACTTCTAGGGTGATGGTTTTACCAGTGAGAGTTTTCACAAAGATTTGCAT 403080 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || ||||| || | || || ||||| ||||| || || Sbjct 403573 CTCCTTTTGGATGTTGTAGTCTGCAAGAGTACGTCCATCCTCGAGCTGTTTACCGGCAAA 403632 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||| |||||||| | || | | |||||||||| ||| ||| |||| | Sbjct 403633 GATAAGTCTTTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTTGCCTTGACATT 403692 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| ||||| |||| ||||| ||||| || || || ||||| Sbjct 403693 GTCAATGGTGTCCGAGCTC---TCCACCTCGAGAGTGATTGTTTTACCAGTGAGAGTCTT 403749 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 403750 GACGAAGATTTGCAT 403764 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || ||||| || | || || ||||| ||||| || || Sbjct 403934 CTCCTTTTGGATGTTGTAGTCTGCAAGAGTACGTCCATCCTCGAGCTGTTTACCGGCAAA 403993 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||| |||||||| | || | | |||||||||| ||| ||| |||| | Sbjct 403994 GATAAGTCTTTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTTGCCTTGACATT 404053 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| ||||| |||| ||||| ||||| || || || ||||| Sbjct 404054 GTCAATGGTGTCCGAGCTC---TCCACCTCGAGAGTGATTGTTTTACCAGTGAGAGTCTT 404110 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 404111 GACGAAGATTTGCAT 404125 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || ||||| || | || || ||||| ||||| || || Sbjct 404162 CTCCTTTTGGATGTTGTAGTCTGCAAGAGTACGTCCATCCTCGAGCTGTTTACCGGCAAA 404221 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||| ||||||||| | || | | |||||||||| ||| || |||| | Sbjct 404222 GATTAGTCTCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 404281 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| || || |||| |||||||| ||||| || || || || Sbjct 404282 ATCGATGGTGTCTGAGCTC---TCTACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTT 404338 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 404339 CACGAAGATTTGCAT 404353 Score = 93.3 bits (102), Expect = 5e-14 Identities = 142/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 42011 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 42070 |||| ||| ||||| || ||||| || || || || || | || || ||||| ||||| Sbjct 403339 TGTGGACTCTTTTTGTATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGTTTACC 403398 Query 42071 AGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 42130 || || || |||| |||||||| | || | | |||||||||| ||| ||| || Sbjct 403399 GGCAAAGATAAGTCTTTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTTGCCTT 403458 Query 42131 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 || | | | ||||| |||| ||||| |||| ||||| ||||| || || || Sbjct 403459 GACATTGTCAATGGTGTCCGAGCTC---TCCACCTCGAGAGTGATTGTTTTACCAGTGAG 403515 Query 42188 CGTCTTTACAAAGATTTGCAT 42208 ||||| || ||||||||||| Sbjct 403516 AGTCTTGACGAAGATTTGCAT 403536 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || ||||||||||| || ||||| || |||| || || || || || || || Sbjct 402205 CTCCTTCTGGATATTGTAATCCGCAAGAGTGCGACCGTCTTCAAGTTGTTTCCCGGCAAA 402264 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||||| ||||||||| | || | || ||||||||| ||| | || | | | ||| Sbjct 402265 GATGAGTCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC-TGAATCTTAGCCTTAACGT 402323 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| ||| ||| || || | || || || ||||| || | |||| Sbjct 402324 TGTCAATGGTGTCTGAGCT---TTCAACTTCCAAGGTAATAGTCTTGCCTGTCAAAGTCT 402380 Query 42193 TTACAAAGATTTGCAT 42208 |||| ||||| ||||| Sbjct 402381 TTACGAAGATCTGCAT 402396 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| || || | ||| || | || || || || ||||| || || Sbjct 403117 CTCCTTTTGGATGTTGTAGTCTGCTAAAGTACGGCCATCCTCAAGTTGTTTACCGGCAAA 403176 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||| |||||||| | || | | |||||||||| ||| || |||| | Sbjct 403177 GATTAGTCTTTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 403236 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| ||||| || | ||||||||||| || || || ||||| Sbjct 403237 ATCAATGGTGTCCGAGCTC---TCCACCTCTAGGGTGATGGTTTTACCAGTGAGAGTCTT 403293 Query 42194 TACAAAGATTTGCAT 42208 |||||||||||||| Sbjct 403294 GACAAAGATTTGCAT 403308 >seq16726 Length=336357 Score = 104 bits (114), Expect = 3e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||| ||||| | ||| || | || || |||||||| || ||||| Sbjct 61306 CTCCTTCTGGATATTGTAGTCAGCTAAAGTGCGTCCATCCTCGAGCTGCTTTCCGGCGAA 61247 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | |||||||||||| | ||| | | ||||||||| ||| || |||| | Sbjct 61246 AATCAATCGCTGCTGGTCCGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 61187 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||||| || |||| ||||| || || |||||||| || || || Sbjct 61186 GTCGATGGTGTCAGAGGATTCGACCTCGAGAGTGATAGTCTTCCCCGTTAGGGTTTTCAC 61127 Query 42197 AAAGATTTGCATTTT 42211 ||||| ||||| || Sbjct 61126 GAAGATCTGCATCTT 61112 >seq17130 Length=165301 Score = 102 bits (112), Expect = 9e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||||||||| | || ||||| | || ||||| || |||||||||||||| Sbjct 19667 CCTCCTCTTAAACGGAGAACTAAATGAAGAGTTGATTCCTTCTGGATATTGTAATCAGCT 19726 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | |||| |||| ||||| || || || ||||| || | || |||||||| | ||| Sbjct 19727 AATGTCCTGCCGTCTTCTAGTTGTTTTCCGGCGAAAATTAACCGTTGCTGGTCCGGTGGG 19786 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | |||||||| ||| || ||||| | | | || || ||||| || Sbjct 19787 ATACCTTCCTTGTCTTGGATCTTCGATTTGACATTGTCGATTGTATCAGATGATTCAACC 19846 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 || | ||||| ||||| ||||| || || || || ||||| ||||| ||| Sbjct 19847 TCAAGGGTGATTGTTTTCCCCGTGAGAGTTTTCACGAAGATCTGCATCTTC 19897 >seq14499 Length=662897 Score = 100 bits (110), Expect = 3e-16 Identities = 166/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||||||||| | || ||||| | || |||||||| || ||||| || || Sbjct 223708 ACCACCTCTTAAACGAAGTACTAAATGAAGGGTTGATTCCTTTTGGATGTTGTAGTCTGC 223767 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || |||| || ||||| ||||||||||| ||||||| || || || | ||| Sbjct 223768 AAGGGTACGACCGTCCTCGAGCTGTTTACCAGCGAAGATGAGTCTTTGTTGATCTGGTGG 223827 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGAT 42155 | | || |||| | ||| | || | |||| ||| | | | ||||| |||| Sbjct 223828 GATCCCTTCTTTGT-CTTGAATCTTAGCCTTGA-CGTTGTCAATGGTGTCAGAGCTC--- 223882 Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || | |||||||||||||| || || || || || ||||||||||| Sbjct 223883 TCGACTTCTAGGGTGATGGTTTTGCCGGTGAGAGTTTTGACGAAGATTTGCAT 223935 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | | ||||| || | || ||||||||| ||||||||||| || Sbjct 223936 ACCACCTCTTAACCTAAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTGTAATCGGC 223995 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | || || | || || || || || || ||||| || |||| |||||| || | || Sbjct 223996 TAAGGTACGGCCATCTTCGAGTTGTTTGCCTGCGAAGATAAGTCTCTGCTGATCTGGAGG 224055 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | |||||||| ||| ||| ||| | | | | ||||| |||| || Sbjct 224056 AATTCCTTCCTTGTCTTGGATCTTTGCTTTAACATTATCGATGGTGTCTGAGCTC---TC 224112 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| |||||||||||||| || || || ||||| ||||||||||| Sbjct 224113 AACCTCGAGAGTGATGGTTTTGCCAGTGAGGGTTTTTACGAAGATTTGCAT 224163 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||||||||||||||| || | || || | || || ||||| || || ||||| Sbjct 224200 CTCCTTTTGAATATTGTAATCGGCTAAGGTACGGCCATCTTCGAGCTGTTTGCCGGCGAA 224259 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||| ||||||||| | || | | |||||||| ||| ||| |||| | Sbjct 224260 GATAAGTCTCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATT 224319 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| ||||| |||| || ||||| ||||| || || || || Sbjct 224320 ATCGATGGTGTCGGAGCTC---TCCACCTCGAGAGTAATGGTCTTGCCAGTGAGAGTTTT 224376 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 224377 CACGAAGATTTGCAT 224391 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/219 (69%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| |||| || | ||| |||||| ||||||||||||||||| |||||||| | Sbjct 223492 ACGCAGGACCAGGTGAAGTGTTGACTCCTTCTGAATATTGTAATCAGCAAGAGTCCGGCC 223551 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || ||||| || || ||||| || || | ||||||||| | ||| | | || || Sbjct 223552 ATCTTCAAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATACCTTCTTT 223611 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 ||| ||| || || | | | | ||||| ||| ||| || || | || Sbjct 223612 GTCTTGGATCTTAGCCTTTACATTATCGATGGTGTCTGAGCT---TTCAACTTCCAAAGT 223668 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||||| || || || || || || || ||||| Sbjct 223669 TATGGTTTTGCCAGTAAGGGTTTTGACGAAAATCTGCAT 223707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543088458590080