Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq14462 125 9e-24 >seq14462 Length=746139 Score = 125 bits (138), Expect = 9e-24 Identities = 387/588 (66%), Gaps = 17/588 (3%) Strand=Plus/Minus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 ||||| || ||||| || ||||| | || || |||||| || || ||||||||||| Sbjct 137923 TGGAGGCCTTCGTCTCGTGAGATTAACTCGTTGGAGAAGGTGAGTCCAGGCATGAGACCT 137864 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 || || || | ||||||||| | || || || ||||||||||| || || || || Sbjct 137863 CGTTTTTTAAGCCAGAAAATGGAGCAGAAACTACCGGAGAAGAAGATACCTTCAACGCAG 137804 Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 127711 ||||| || | | |||||| ||||||| | || | || | ||| |||||||| Sbjct 137803 GCGAAGGCTACGATACGCTCCGCAAAGGTTTGAGA---TCCGTCGATCCAAGTCATCGCC 137747 Query 127712 CACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTT 127770 || || || || || | | ||| |||| || | ||| || |||||| | | |||| Sbjct 137746 CATTGCGCTTTCTTGGCAACACACGGGATTGTTTCGATTGCGCGAAAGAGATGGTCTCTT 137687 Query 127771 T-TCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG--TGGAC 127827 | | || || || |||||||| |||| | || | || ||| || ||| || | Sbjct 137686 TCTTTGTTG--TCCTTGATGTAGGTATCAAGAAG--TAGACTATACATCTCCGAATGAAT 137631 Query 127828 CATTTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATC 127887 | ||| | | ||| | ||||||||| ||||| || || ||| | |||| Sbjct 137630 ATTCTCAATCGCGATTTGAAATCCGTAGAAAGCACGCGCCTCCGATACCTGAA---CATC 137574 Query 127888 GG-CA-AAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 127944 || || ||| | || | |||||| || || || ||||| || | || || || || Sbjct 137573 GGACATGAATCGAGATGCAAGATTCTCCAAGACGATGCCATCAGAGGCGGCGAAGAAGGC 137514 Query 127945 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGTCGAGATC 128004 | || || ||| ||||| | |||| ||||| | ||| ||| ||| || Sbjct 137513 TAAGACATGCTTGATGAAGTGTCGTTCGCCGTCGTTTAAATTCTCCCAATCGCGTCCGTC 137454 Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTC 128064 || ||| ||||| || ||||| ||||||||| | | |||||||| || | || Sbjct 137453 CTGTGATAGATCGACTTCCTCGGCAGTCCAAAACGACGCCTCGGCCTTCTTGTACATCTC 137394 Query 128065 CCAGAGGTGGGGATACTTCAGGGGGAACACTGTAAATCTGTTTAGGGT 128112 ||||| || || || | | ||||||| |||||||| | |||| Sbjct 137393 CCAGATCTGTGGGTATTGAATCGGGAACATACAAAATCTGTCTGGGGT 137346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613366768201920