Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq14462 125 9e-24
>seq14462
Length=746139
Score = 125 bits (138), Expect = 9e-24
Identities = 387/588 (66%), Gaps = 17/588 (3%)
Strand=Plus/Minus
Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591
||||| || ||||| || ||||| | || || |||||| || || |||||||||||
Sbjct 137923 TGGAGGCCTTCGTCTCGTGAGATTAACTCGTTGGAGAAGGTGAGTCCAGGCATGAGACCT 137864
Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651
|| || || | ||||||||| | || || || ||||||||||| || || || ||
Sbjct 137863 CGTTTTTTAAGCCAGAAAATGGAGCAGAAACTACCGGAGAAGAAGATACCTTCAACGCAG 137804
Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 127711
||||| || | | |||||| ||||||| | || | || | ||| ||||||||
Sbjct 137803 GCGAAGGCTACGATACGCTCCGCAAAGGTTTGAGA---TCCGTCGATCCAAGTCATCGCC 137747
Query 127712 CACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTT 127770
|| || || || || | | ||| |||| || | ||| || |||||| | | ||||
Sbjct 137746 CATTGCGCTTTCTTGGCAACACACGGGATTGTTTCGATTGCGCGAAAGAGATGGTCTCTT 137687
Query 127771 T-TCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG--TGGAC 127827
| | || || || |||||||| |||| | || | || ||| || ||| || |
Sbjct 137686 TCTTTGTTG--TCCTTGATGTAGGTATCAAGAAG--TAGACTATACATCTCCGAATGAAT 137631
Query 127828 CATTTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATC 127887
| ||| | | ||| | ||||||||| ||||| || || ||| | ||||
Sbjct 137630 ATTCTCAATCGCGATTTGAAATCCGTAGAAAGCACGCGCCTCCGATACCTGAA---CATC 137574
Query 127888 GG-CA-AAATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 127944
|| || ||| | || | |||||| || || || ||||| || | || || || ||
Sbjct 137573 GGACATGAATCGAGATGCAAGATTCTCCAAGACGATGCCATCAGAGGCGGCGAAGAAGGC 137514
Query 127945 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGTCGAGATC 128004
| || || ||| ||||| | |||| ||||| | ||| ||| ||| ||
Sbjct 137513 TAAGACATGCTTGATGAAGTGTCGTTCGCCGTCGTTTAAATTCTCCCAATCGCGTCCGTC 137454
Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTC 128064
|| ||| ||||| || ||||| ||||||||| | | |||||||| || | ||
Sbjct 137453 CTGTGATAGATCGACTTCCTCGGCAGTCCAAAACGACGCCTCGGCCTTCTTGTACATCTC 137394
Query 128065 CCAGAGGTGGGGATACTTCAGGGGGAACACTGTAAATCTGTTTAGGGT 128112
||||| || || || | | ||||||| |||||||| | ||||
Sbjct 137393 CCAGATCTGTGGGTATTGAATCGGGAACATACAAAATCTGTCTGGGGT 137346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613366768201920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |