Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq14462 228 8e-55
seq14499 147 2e-30
seq16023 136 4e-27
seq14413 131 2e-25
seq12257 104 2e-17
seq16577 95.1 1e-14
>seq14462
Length=746139
Score = 228 bits (252), Expect = 8e-55
Identities = 417/602 (69%), Gaps = 14/602 (2%)
Strand=Plus/Minus
Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954
||||| || |||||||| | ||| ||||| | || || | |||||| ||| || |
Sbjct 137938 CAAGCGAAATCGCAATGGAGGCCTTCGTCTCGTGAGATTAACTCGTTGGAGAAGGTGAGT 137879
Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014
|| |||||||| || |||||||| ||||| || |||| | |||||| || || ||||||
Sbjct 137878 CCAGGCATGAGACCTCGTTTTTTAAGCCAGAAAATGGAGCAGAAACTACCGGAGAAGAAG 137819
Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCG 133074
| || || ||| ||||| || || | ||||| | || || || | | ||
Sbjct 137818 ATACCTTCAACGCAGGCGAAGGCTACGATACGCTCCGCAAAGGT---TTGAGATCCGTCG 137762
Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGCGT 133132
||||| || |||||||| || |||||| | || ||||| || |||||||| |||
Sbjct 137761 ATCCAAGTCATCGCCCATTGCGC--TTTCTTGGCAACACACGGGATTGTTTCGATTGCGC 137704
Query 133133 TCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGA--ATA 133190
|| | | || | | |||| | | |||||| || | || | || |||
Sbjct 137703 GAAAGAGATGGTCTCTTTCTTTGTTGTCCTTGATGTAGGTATCAAGAAG--TAGACTATA 137646
Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACCGCGCCTCGA 133249
||| ||||| || | ||||| || ||||||||||| ||||| ||||||| |||||||
Sbjct 137645 CATCTCCGAATGAATATTCTCAATCGCGATTTGAAATCCGTAGAAAGCAC-GCGCCTCCG 137587
Query 133250 CCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGG 133309
||||| || || ||| || | ||||| || ||||||||| || ||
Sbjct 137586 ATACCTGAACATCGGACATGAATCGAGATGCAAGATTCTCCAAGACGATGCCATCAGAGG 137527
Query 133310 CGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCC 133369
||||||| ||||| | || ||||||||||| || || ||| |||||| || |||||
Sbjct 137526 CGGCGAAGAAGGCTAAGACATGCTTGATGAAGTGTCGTTCGCCGTCGTTTAAATTCTCCC 137467
Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429
| ||||| ||||| || || || || |||||| | |||||||||||||||||||| |
Sbjct 137466 AATCGCGTCCGTCCTGTGATAGATCGACTTCCTCGGCAGTCCAAAACGACGCCTCGGCCT 137407
Query 133430 TTTTGTACATACTCCACATGTCCGAATATTGTAT-GGGAAAAATCACAAACCGGCGGGGG 133488
| |||||||| ||| || | | ||||| || ||||| | || || | | | ||||
Sbjct 137406 TCTTGTACATCTCCCAGATCTGTGGGTATTGAATCGGGAACATACAAAATCTGTCTGGGG 137347
Query 133489 TT 133490
||
Sbjct 137346 TT 137345
>seq14499
Length=662897
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| ||||| ||||||||||||||| | || |||||| | |
Sbjct 223935 ATGCAAATCTTCGTCAAAACTCTCACCGGCAAAACCATCACCCTAGAAGTCGAGAGCTCT 223876
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || || | |||||||| || || || | || ||
Sbjct 223875 GACACCATTGACAACG-TCAAGGCTAAGATTCAAGACAAAGAAGGGATCCCACCAGATCA 223817
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | ||||| | ||| || |||||||| || |||| || ||||| ||||||||
Sbjct 223816 ACAAAGACTCATCTTCGCTGGTAAACAGCTCGAGGACGGTCGTACCCTTGCAGACTACAA 223757
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||| | || || ||||| || || ||||| ||||| ||
Sbjct 223756 CATCCAAAAGGAATCAACCCTTCATTTAGTACTTCGTTTAAGAGGTGG 223709
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||||||||| ||||| |||||||||||||| |||| || ||| | |
Sbjct 224163 ATGCAAATCTTCGTAAAAACCCTCACTGGCAAAACCATCACTCTCGAGGTTGAGAGCTCA 224104
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | |||||| ||| |||| ||||| || |||||||| | || ||
Sbjct 224103 GACACCATCGATAATGTTAAAGCAAAGATCCAAGACAAGGAAGGAATTCCTCCAGATCAG 224044
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || || | ||| |||||||| || || || | || ||| | ||| |||||
Sbjct 224043 CAGAGACTTATCTTCGCAGGCAAACAACTCGAAGATGGCCGTACCTTAGCCGATTACAAT 223984
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||| | || || || ||||| || | || ||||| ||
Sbjct 223983 ATCCAAAAGGAGTCAACTCTACACTTGGTTCTTAGGTTAAGAGGTGG 223937
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| ||||| ||||| ||||| || |||| || ||| | ||
Sbjct 224391 ATGCAAATCTTCGTGAAAACTCTCACTGGCAAGACCATTACTCTCGAGGTGGAGAGCTCC 224332
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | ||| |||| ||||| || |||||||| | |||||
Sbjct 224331 GACACCATCGATAATGTCAAGGCAAAGATCCAAGACAAGGAAGGAATTCCTCCAGACCAG 224272
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || || | ||| ||||||||||| || || | || ||| | ||| |||||
Sbjct 224271 CAGAGACTTATCTTCGCCGGCAAACAGCTCGAAGATGGCCGTACCTTAGCCGATTACAAT 224212
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| |||||||| | || || ||| | || || | ||||| || ||
Sbjct 224211 ATTCAAAAGGAGTCAACCCTCCATCTAGTTCTCAGGTTGAGGGGTGG 224165
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| || || || ||||||||||| | || || || | ||
Sbjct 223479 ATGCAGATTTTCGTCAAAACCCTAACCGGTAAAACCATCACATTAGAAGTTGAAAGCTCC 223420
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | |||| || |||| |||||||| || || || | |||||
Sbjct 223419 GACACCATCGATAATGTAAAAGCTAAGATCCAAGACAAAGAAGGTATCCCACCAGACCAG 223360
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| | ||||| | ||| || |||||||| || || | || ||| | ||||||||
Sbjct 223359 CAAAGACTCATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACCTTAGCTGACTACAAT 223300
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| |||||||| | || || || |||| ||||||
Sbjct 223299 ATACAAAAGGAGTCAACTCTTCACCTGGTCCTGCGT 223264
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| || || ||||||||||| || | || || || | |
Sbjct 223707 ATGCAGATTTTCGTCAAAACCCTTACTGGCAAAACCATAACTTTGGAAGTTGAAAGCTCA 223648
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| |||||||| || || || | |||||
Sbjct 223647 GACACCATCGATAATGTAAAGGCTAAGATCCAAGACAAAGAAGGTATCCCACCGGACCAG 223588
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | ||| || |||||||| || || | || || || || |||||
Sbjct 223587 CAGAGGCTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGGACTCTTGCTGATTACAAT 223528
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || ||||| | || || || |||| ||||||
Sbjct 223527 ATTCAGAAGGAGTCAACACTTCACCTGGTCCTGCGT 223492
>seq16023
Length=121467
Score = 136 bits (150), Expect = 4e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | || ||||||||||||||| | || || ||| | |
Sbjct 24841 ATGCAGATCTTCGTTAAAACCTTGACCGGCAAAACCATCACCCTTGAGGTTGAGAGCTCT 24782
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| |||||| ||||||| |||||||||||||| || | |||||
Sbjct 24781 GACACCATCGACAACG-TTAAAGCCAAAATCCAGGACAAAGAGGGAATCCCACCGGACCA 24723
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | ||| || || ||||| || || | ||||| | |||||||||
Sbjct 24722 GCAACGTCTCATCTTCGCCGGTAAGCAGCTTGAGGATGGTCGCACTTTAGCCGACTACAA 24663
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || |||||||| || |||
Sbjct 24662 CATCCAGAAGGAGTCAACCCTCCATTTGGTCCTTCGT 24626
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | |||||||| ||||||||| | || || || | ||
Sbjct 25297 ATGCAAATCTTCGTTAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTGGAAAGCTCC 25238
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| |||||| ||| |||| ||||| |||||||| ||| | |||||
Sbjct 25237 GATACCATCGACAACG-TTAAAGCAAAGATCCAAGACAAGGAGGGAATCCCCCCGGACCA 25179
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || || ||||| || || | || || || || |||||
Sbjct 25178 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGTCGTACTCTAGCTGATTACAA 25119
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || ||||| |||||
Sbjct 25118 CATCCAGAAGGAGTCAACCCTTCACTTGGTCTTGCGT 25082
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| || |||||||| || || ||| | || || ||| | ||
Sbjct 25525 ATGCAAATCTTCGTCAAAACCCTAACGGGCAAGACGATTACCTTGGAGGTTGAGAGCTCC 25466
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | |||| || |||| || || || || || || | |||||
Sbjct 25465 GACACCATCGACAACG-TCAAAGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCA 25407
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || ||||| || || |||| || ||| | ||||||||
Sbjct 25406 GCAGAGGTTGATCTTCGCTGGTAAACAACTCGAGGACGGCCGTACCTTGGCTGACTACAA 25347
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
|||||| || || ||||||| || ||||| ||
Sbjct 25346 CATCCAGAAAGAGTCGACGCTCCACTTGGTCCT 25314
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || || || ||||| ||| |||| || ||| | |
Sbjct 24613 ATGCAGATTTTTGTTAAGACCTTGACCGGTAAGACCATTACCCTCGAAGTGGAGAGCTCT 24554
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || || || | |||||
Sbjct 24553 GACACCATAGACAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCA 24495
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | ||||||||| ||||||||
Sbjct 24494 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTCGCTGACTACAA 24435
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| |||||||| | || || || ||||| || |||
Sbjct 24434 CATTCAAAAGGAGTCCACACTCCACTTGGTCCTCCGT 24398
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | ||||| || |||||||| | || || ||| | |
Sbjct 25069 ATGCAGATCTTTGTGAAGACTTTAACGGGAAAGACCATCACTTTGGAGGTGGAGAGCTCT 25010
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||||| ||||| || || || || | |||||
Sbjct 25009 GACACCATCGACAACG-TCAAGGCTAAAATCCAGGACAAGGAAGGTATCCCACCGGACCA 24951
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | | || | ||| ||||||||||| || |||| || ||||| |||||||||
Sbjct 24950 GCAGAGATTGATCTTCGCTGGCAAACAGCTCGAGGACGGTCGTACCCTAGCCGACTACAA 24891
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || || ||||| |||||
Sbjct 24890 CATCCAGAAGGAGTCCACTCTTCACTTGGTCTTGCGT 24854
>seq14413
Length=739167
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| ||||| || |||||||||||| | || || ||| | |
Sbjct 403080 ATGCAAATCTTTGTGAAAACTCTCACTGGTAAAACCATCACCCTAGAAGTTGAGAGCTCA 403021
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | |||| || || | || |||||||| || || | |||||
Sbjct 403020 GACACCATTGACAATGTCAAAGCTAAGATTCAAGATAAAGAGGGTATCCCTCCGGACCAG 402961
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || || | ||| || |||||||| || || | || || || |||||||||
Sbjct 402960 CAGAGACTTATCTTCGCCGGTAAACAGCTCGAGGATGGTCGTACTCTAGCTGACTACAAC 402901
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| |||||| | || || || |||||||| ||||||||||| ||
Sbjct 402900 ATCCAGAAGGAATCCACCCTCCACTTGGTGCTTCGTTTGAGAGGTGG 402854
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || ||||| || || || |||||||||||||| | || || ||| ||
Sbjct 402852 ATGCAAATTTTTGTAAAGACCCTTACCGGCAAAACCATCACTTTAGAGGTTGAGAGTTCC 402793
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | |||| || |||| |||||||| ||||| || | |||||
Sbjct 402792 GACACCATTGACAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATCCCTCCAGACCAG 402733
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || || | || || |||||||| || || | || ||||| |||||||||
Sbjct 402732 CAGAGACTTATCTTTGCCGGTAAACAGCTAGAAGATGGCCGTACCCTTGCTGACTACAAC 402673
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| | || || ||| | ||||| |||
Sbjct 402672 ATCCAAAAGGAGTCCACACTCCATCTTGTGCTTCGT 402637
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| ||||| ||||| |||||||| |||| || ||| | |
Sbjct 404353 ATGCAAATCTTCGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTAGAGAGCTCA 404294
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||||||||| | |||||
Sbjct 404293 GACACCATCGATAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAG 404234
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || || | || || |||||||| || || | || || || |||||||||
Sbjct 404233 CAGAGACTAATCTTTGCCGGTAAACAGCTCGAGGATGGACGTACTCTTGCAGACTACAAC 404174
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| | || || ||| | || || |||
Sbjct 404173 ATCCAAAAGGAGTCCACCCTCCATCTTGTCCTACGT 404138
Score = 105 bits (116), Expect = 7e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| || ||||| ||||| |||| || ||| | |
Sbjct 403764 ATGCAAATCTTCGTCAAGACTCTCACTGGTAAAACAATCACTCTCGAGGTGGAGAGCTCG 403705
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | ||| |||| ||||| ||||||||||| | |||||
Sbjct 403704 GACACCATTGACAATGTCAAGGCAAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAG 403645
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| | || || | || || |||||||| || || | || || || |||||||||
Sbjct 403644 CAAAGACTTATCTTTGCCGGTAAACAGCTCGAGGATGGACGTACTCTTGCAGACTACAAC 403585
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| | || || ||| | || || |||
Sbjct 403584 ATCCAAAAGGAGTCCACCCTCCATCTTGTCCTACGT 403549
Score = 105 bits (116), Expect = 7e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| || ||||| ||||| |||| || ||| | |
Sbjct 404125 ATGCAAATCTTCGTCAAGACTCTCACTGGTAAAACAATCACTCTCGAGGTGGAGAGCTCG 404066
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | ||| |||| ||||| ||||||||||| | |||||
Sbjct 404065 GACACCATTGACAATGTCAAGGCAAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAG 404006
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| | || || | || || |||||||| || || | || || || |||||||||
Sbjct 404005 CAAAGACTTATCTTTGCCGGTAAACAGCTCGAGGATGGACGTACTCTTGCAGACTACAAC 403946
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||| | || || ||| | || || |||
Sbjct 403945 ATCCAAAAGGAGTCCACCCTCCATCTTGTCCTACGT 403910
Score = 102 bits (112), Expect = 8e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| || ||||| ||||| |||| || ||| | |
Sbjct 403536 ATGCAAATCTTCGTCAAGACTCTCACTGGTAAAACAATCACTCTCGAGGTGGAGAGCTCG 403477
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | ||| |||| ||||| ||||||||||| | |||||
Sbjct 403476 GACACCATTGACAATGTCAAGGCAAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAG 403417
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| | || || | || || |||||||| || || | |||||||| |||||||||
Sbjct 403416 CAAAGACTTATCTTTGCCGGTAAACAGCTCGAGGATGGCCGCACCCTTGCAGACTACAAC 403357
Query 38424 ATCCAAAAGGA 38434
|| ||||| ||
Sbjct 403356 ATACAAAAAGA 403346
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || ||||| || || || |||||||||||||| | || || ||| | |
Sbjct 402624 ATGCAGATTTTTGTAAAGACCCTTACCGGCAAAACCATCACTCTAGAAGTTGAGAGCTCA 402565
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | |||| || || | ||||| ||||| ||||| | |||||
Sbjct 402564 GACACCATTGACAATGTAAAAGCTAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 402505
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | || || |||||||| || || | |||||||| || ||||||
Sbjct 402504 CAACGTTTGATCTTTGCAGGAAAACAGCTCGAAGATGGCCGCACCCTTGCAGATTACAAC 402445
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || |||||| | || || || ||||||| |||
Sbjct 402444 ATTCAGAAGGAATCAACTCTTCACCTGGTGCTACGT 402409
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || ||||| || |||||||||||| | || || ||| | |
Sbjct 403308 ATGCAAATCTTTGTCAAGACTCTCACTGGTAAAACCATCACCCTAGAGGTGGAGAGCTCG 403249
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||||||||| | |||||
Sbjct 403248 GACACCATTGATAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCTCCGGACCAG 403189
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| | || || | || || ||||| || || || | || || | |||||||||
Sbjct 403188 CAAAGACTAATCTTTGCCGGTAAACAACTTGAGGATGGCCGTACTTTAGCAGACTACAAC 403129
Query 38424 ATCCAAAAGGA 38434
|||||||||||
Sbjct 403128 ATCCAAAAGGA 403118
>seq12257
Length=1143886
Score = 104 bits (114), Expect = 2e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298
|||| ||||| || ||||| ||||| || ||||| || || |||||| | || || ||
Sbjct 1016424 AAAAGATGCAGATTTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTAGAGGTTGAAT 1016365
Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|| | || | | | | | |||| || |||| ||||| || || || || | |
Sbjct 1016364 CCTCTGATACGATCGATAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATCCCACCGG 1016305
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
| || || ||| | || | ||| || || || |||| |||| | || ||| || |
Sbjct 1016304 ATCAGCAACGGTTGATCTTCGCCGGAAAGCAATTGGAGGACGGTAGAACTCTCGCGGATT 1016245
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||| |||||| | ||||| || ||||| || ||||||||||| ||
Sbjct 1016244 ACAACATCCAGAAGGAATCAACGCTTCACTTGGTTCTCCGTTTGAGAGGAGG 1016193
>seq16577
Length=433012
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || ||||| ||||| || ||||| ||||| || || | || ||||| |
Sbjct 33857 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACGATAACTCTTGAAGTCGAATC 33798
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| || | | | | | |||| || || | || ||||| |||||||| | ||
Sbjct 33797 ATCAGATACAATCGACAATGTCAAAGCCAAGATTCAGGATAAAGAAGGAATTCCACCGGA 33738
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| || || | |||| ||| || ||||| || || |||| || || || ||| ||
Sbjct 33737 TCAGCAACGTTTGATTTTCGCTGGAAAACAACTCGAAGACGGTCGTACTCTTGCCGATTA 33678
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||| |||||| ||||||| ||| | || || |||
Sbjct 33677 CAACATCCAGAAGGAATCGACGCTTCATCTCGTTCTTCGT 33638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500058310446080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |