Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq14462 129 1e-24 >seq14462 Length=746139 Score = 129 bits (142), Expect = 1e-24 Identities = 421/648 (65%), Gaps = 12/648 (2%) Strand=Plus/Minus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| |||| |||| ||| || || | || || ||| ||||| ||||| Sbjct 138026 AAACTCCCTCTCGATCTCCACTGCGTCGCATACGATTGACTTCACGCGCTCCTCTGTTAA 137967 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 |||| | | |||| | ||| ||||||| || || || || | || | ||||||||| Sbjct 137966 TTTGGTTCTCAGGAGATTG---TAGAGCAGACAAGCGAAATCGCAATGGAGGCCTTCGTC 137910 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || ||| | | ||||||||||| ||| |||||||||| || | | ||| ||||| Sbjct 137909 TCGTGAGATTAACTCGTTGGAGAAGGTGAGTCCAGGCATGAGACCTCGTTTTTTAAGCCA 137850 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 |||||| | |||| || ||||||||||| || || || ||||| || | | Sbjct 137849 GAAAATGGAGCAGAAACTACCGGAGAAGAAGATACCTTCAACGCAGGCGAAGGC--TACG 137792 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTG-AGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338 | ||||| | ||| || || | |||||| | | |||||| | || |||| Sbjct 137791 ATACGCTCCGCA--AAGGTTTGAGATCCGTCGATCCAAGTCATCGCCCATTGCGCTTTCT 137734 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCG 48398 | | || || || || || || || || ||||| | | | || |||| Sbjct 137733 TGGCAACACACGGGATTGTTTCGATTGCGCGAAAGAGATGGTCTCTTTCTTTGTTGTCCT 137674 Query 48399 CAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCT 48458 | |||||| || || |||||||| || || | |||||| || ||||| | Sbjct 137673 TGATGTAGGTATCAAGAAGTAGACTATACATCTCCGAATGAATATTCTCAATCGCGATTT 137614 Query 48459 GGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATC--TCTCCAG 48516 | || |||||||| || | ||||| | ||||| || || | ||||| | || Sbjct 137613 GAAATCCGTAGAAAGCACGCGCCTCCGATACCTGAACATCGGACATGAATCGAGATGCA- 137555 Query 48517 CAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAA 48576 |||||||| ||| || ||||| || || || |||||||| | |||||| || | ||| Sbjct 137554 -AGATTCTCCAAGACGATGCCATCAGAGGCGGCGAAGAAGGCTAAGACATGCTTGATGAA 137496 Query 48577 ATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTC 48636 || || ||| || | | | | | ||| | || |||| | || || ||||| Sbjct 137495 GTGTCGTTCGCCGTCGTTTAAATTCTCCCAATCGCGTCCGTCCTGTGATAGATCGACTTC 137436 Query 48637 TTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 || ||||||| || ||||| || || |||||||| |||| || Sbjct 137435 CTCGGCAGTCCAAAACGACGCCTCGGCCTTCTTGTACATCTCCCAGAT 137388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931319572142080