Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq14462 129 1e-24
>seq14462
Length=746139
Score = 129 bits (142), Expect = 1e-24
Identities = 421/648 (65%), Gaps = 12/648 (2%)
Strand=Plus/Minus
Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099
||||||| |||| |||| ||| || || | || || ||| ||||| |||||
Sbjct 138026 AAACTCCCTCTCGATCTCCACTGCGTCGCATACGATTGACTTCACGCGCTCCTCTGTTAA 137967
Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159
|||| | | |||| | ||| ||||||| || || || || | || | |||||||||
Sbjct 137966 TTTGGTTCTCAGGAGATTG---TAGAGCAGACAAGCGAAATCGCAATGGAGGCCTTCGTC 137910
Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219
|| ||| | | ||||||||||| ||| |||||||||| || | | ||| |||||
Sbjct 137909 TCGTGAGATTAACTCGTTGGAGAAGGTGAGTCCAGGCATGAGACCTCGTTTTTTAAGCCA 137850
Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279
|||||| | |||| || ||||||||||| || || || ||||| || | |
Sbjct 137849 GAAAATGGAGCAGAAACTACCGGAGAAGAAGATACCTTCAACGCAGGCGAAGGC--TACG 137792
Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTG-AGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338
| ||||| | ||| || || | |||||| | | |||||| | || ||||
Sbjct 137791 ATACGCTCCGCA--AAGGTTTGAGATCCGTCGATCCAAGTCATCGCCCATTGCGCTTTCT 137734
Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCG 48398
| | || || || || || || || || ||||| | | | || ||||
Sbjct 137733 TGGCAACACACGGGATTGTTTCGATTGCGCGAAAGAGATGGTCTCTTTCTTTGTTGTCCT 137674
Query 48399 CAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCT 48458
| |||||| || || |||||||| || || | |||||| || ||||| |
Sbjct 137673 TGATGTAGGTATCAAGAAGTAGACTATACATCTCCGAATGAATATTCTCAATCGCGATTT 137614
Query 48459 GGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATC--TCTCCAG 48516
| || |||||||| || | ||||| | ||||| || || | ||||| | ||
Sbjct 137613 GAAATCCGTAGAAAGCACGCGCCTCCGATACCTGAACATCGGACATGAATCGAGATGCA- 137555
Query 48517 CAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAA 48576
|||||||| ||| || ||||| || || || |||||||| | |||||| || | |||
Sbjct 137554 -AGATTCTCCAAGACGATGCCATCAGAGGCGGCGAAGAAGGCTAAGACATGCTTGATGAA 137496
Query 48577 ATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTC 48636
|| || ||| || | | | | | ||| | || |||| | || || |||||
Sbjct 137495 GTGTCGTTCGCCGTCGTTTAAATTCTCCCAATCGCGTCCGTCCTGTGATAGATCGACTTC 137436
Query 48637 TTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
|| ||||||| || ||||| || || |||||||| |||| ||
Sbjct 137435 CTCGGCAGTCCAAAACGACGCCTCGGCCTTCTTGTACATCTCCCAGAT 137388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931319572142080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |