Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq14462 107 4e-18 >seq14462 Length=746139 Score = 107 bits (118), Expect = 4e-18 Identities = 382/575 (66%), Gaps = 23/575 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| | || ||||| ||||| || | ||||| Sbjct 137388 ATCTGGGAGATGTACAAGAAGGCCGAGGCGTCGTTTTGGACTGCCGAGGAAGTCGATCTA 137447 Query 25537 GCCAAGGACATGGACGGC--TGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT 25594 | ||||| ||||| ||| | | || | | | ||| | || || ||||| Sbjct 137448 TCACAGGAC--GGACGCGATTGGGAGAATTTAAACGACGGCGAACGACACTTCATCAAGC 137505 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC-GAGAGA 25653 | || || || ||||| || ||||||||||| || || |||||||| ||| || Sbjct 137506 ATGTCTTAGCCTTCTTCGCCGCCTCTGATGGCATCGTCTTGGAGAATCT-TGCATCTCGA 137564 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCAT 25712 |||| || || ||| ||||| | ||| ||||||||| || || || || || Sbjct 137565 TTCATGTCCGATGTTCAGGTATCGGAGG-CGCGTGCTTTCTACGGATTTCAAATCGCGAT 137623 Query 25713 CGAAAATGTGCACTCTGAGGTGTAT-GCCAAGCTTC-TGATGACGTACATTACAGACGTC 25770 || ||| | || || ||| ||||| | | | |||| |||| || ||||| | ||| | Sbjct 137624 TGAGAATATTCATTCGGAGATGTATAGTCTA-CTTCTTGAT-ACCTACATCAAGGACAAC 137681 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 || ||||| | || ||| | || ||||| || || | | | ||| ||| Sbjct 137682 AAAGAAAGAGACCATCTCTTTCGCGCAATCGAAACAATCCCGTGTGTTGCCAAGAAAGCG 137741 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGC-TACGTTTGGCGAGCGGCTGGTAGC 25889 | ||||| |||| |||||| | | || | | || |||| ||||| | ||||| Sbjct 137742 CAATGGGCGATGACTTGGATC----GACGGATCTCAAACCTTTGCGGAGCGTATCGTAGC 137797 Query 25890 CTTTG-CTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTC 25947 ||| | |||| || || || ||||| ||| |||| || ||| |||| |||||||| Sbjct 137798 CTTCGCCTGC-GTTGAAGGTATCTTCTTCTCCGGTAGTTTCTGC-TCCATTTTCTGGCTT 137855 Query 25948 AAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 || | | | || | |||||| || || ||| ||||||||| | ||| | ||||| Sbjct 137856 AA-AAAACGAGGTCTCATGCCTGGACTCACCTTCTCCAACGAGTTAATCTCACGAGACGA 137914 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 || ||||| | ||||| || || |||||||||| Sbjct 137915 AGGCCTCCATTGCGATTTCGCTTGTCTGCTCTACA 137949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928632187425280