Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq14462 98.7 2e-15
>seq14462
Length=746139
Score = 98.7 bits (108), Expect = 2e-15
Identities = 216/322 (67%), Gaps = 10/322 (3%)
Strand=Plus/Plus
Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923
||||| || || || ||||||||||| ||||| || ||| |||||| | || || |||
Sbjct 137793 GTAGCCTTCGCCTGCGTTGAAGGTATCTTCTTCTCCGGTAGTTTCTGCTCCATTTTCTGG 137852
Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983
||||| || || || | |||||||||||| | || ||||| | || ||||| ||||
Sbjct 137853 CTTAAAAAACGAGGTCTCATGCCTGGACTCACCTTCTCCAACGAGTTAATCTCACGAGAC 137912
Query 131984 GAAGCATTGCATACTGAATTTGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGAT 132043
|||| | ||| || || ||| | ||| | ||| | |||| ||| ||
Sbjct 137913 GAAGGCCTCCATTGCGATTTCGCTTGTCTGCTCT----ACAATCTCCTGA-GAACCAAAT 137967
Query 132044 GAAAATAATA-----TTAAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTA 132098
|| | | | | || | | || |||| ||||| || ||||||| |||||||
Sbjct 137968 TAACAGAGGAGCGCGTGAAGTCAATCGTATGCGACGCAGTGGAGATCGAGAGGGAGTTTG 138027
Query 132099 TTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACA 132158
| || || | || ||| ||| ||||||||||| |||| |||| | ||||
Sbjct 138028 TGTGCGACGCGCTTCCGTGCGCGTTGGTTGGGATGAATCGTGACCTAATGAGTCAATACA 138087
Query 132159 TTGAATTCGTTGCTGATCGTTT 132180
| |||||||| || ||||| ||
Sbjct 138088 TCGAATTCGTAGCGGATCGGTT 138109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186534347013832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |