Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14]
18,312 sequences; 192,487,774 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq16938 91.5 1e-13
>seq16938
Length=276168
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412
|||||||| || | || ||||||||| || || || | ||| || || ||| |||||
Sbjct 257162 GACAAAGAGGGTATACCACCTGATCAACAGAGACTCATCTTTGCCGGTAAGCAACTAGAA 257103
Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472
||| | ||| | | |||||||||||| || ||||||||||| || ||| |||| |||
Sbjct 257102 GATGGCAGAACACTTGCCGATTACAACATCCAGAAAGAATCTACTCTTCATCTAGTCTTG 257043
Query 106473 AGGTTACGAGGAGGA 106487
||| | |||| |||
Sbjct 257042 AGGCTTAGAGGTGGA 257028
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412
|||||||| || | || ||||||||| || || || | |||||| || ||| |||||
Sbjct 249658 GACAAAGAGGGTATACCACCTGATCAACAGAGACTCATCTTTGCGGGTAAGCAACTAGAA 249717
Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472
||| | ||| | | ||||||||||| || ||||| ||||| || ||| |||| |||
Sbjct 249718 GATGGAAGAACACTTGCGGATTACAACATCCAGAAAGAGTCTACTCTTCATCTAGTCTTG 249777
Query 106473 AGGTTACGAGGAGGA 106487
||| | |||| |||
Sbjct 249778 AGGCTTAGAGGTGGA 249792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402239809085696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |