Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq14462 116 4e-21 >seq14462 Length=746139 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| | ||| || |||| || || ||||| ||||| ||||||||||| || ||| Sbjct 137778 TTTGCGGAGCGTATCGTAGCCTTCGCCTGCGTTGAAGGTATCTTCTTCTCCGGTAGTTTC 137837 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 || | ||||||||||| ||||| || || |||||||| || || | |||||||||||| Sbjct 137838 TGCTCCATTTTCTGGCTTAAAAAACGAGGTCTCATGCCTGGACTCACCTTCTCCAACGAG 137897 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCAT 60119 | || || || ||||| ||||||||| Sbjct 137898 TTAATCTCACGAGACGAAGGCCTCCAT 137924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548399242673280