Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq17927 89.7 2e-13 seq17748 86.0 2e-12 >seq17927 Length=56337 Score = 89.7 bits (98), Expect = 2e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 21139 CCCTTTCAAGTCGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGC 21198 || ||||| ||| |||||||||| |||||||||| ||||||||||| |||||| | Sbjct 7990 CCTTTTCATCGCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCAC 7931 Query 21199 AGGTTCGAATCCTGTCTCCGCAAC 21222 ||||| ||||||||||||||||| Sbjct 7930 GGGTTCAAATCCTGTCTCCGCAAC 7907 >seq17748 Length=19180 Score = 86.0 bits (94), Expect = 2e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||| ||| |||||||||||||| | || Sbjct 12067 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATGACCTTGAGGTCGCAGGTTCAATTC 12008 Query 21210 CTGTCTCCGCAACCAGT 21226 |||||||||| || ||| Sbjct 12007 CTGTCTCCGCTACAAGT 11991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162489458169616