Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethionema_20arabicum_20[genbank_20GCA_5F000411095.1_202013-06-14] 18,312 sequences; 192,487,774 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq14462 118 1e-21 seq17369 91.5 2e-13 >seq14462 Length=746139 Score = 118 bits (130), Expect = 1e-21 Identities = 344/524 (66%), Gaps = 7/524 (1%) Strand=Plus/Minus Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| || ||||| ||||| |||||||| || | || || || || || || || | Sbjct 137939 ACAAGCGAAATCGCAATGGAGGCCTTCGTCTCGTGAGATTAACTCGTTGGAGAAGGTGAG 137880 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT-CCGGAAAAGA 23626 ||| ||||| | ||||||||||||| ||| || || | |||| | | ||||| |||| Sbjct 137879 TCCAGGCATGAGACCTCGTTTTTTAAGCCAGAAAATGG-AGCAGAAACTACCGGAGAAGA 137821 Query 23627 AAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAG 23686 | ||||| ||||| || ||||| || | ||| |||| ||| | | | | Sbjct 137820 AGATACCTTCAACGCAGGCGAAGGCTACGATACGCTCCGCAAAGGTT---TGAGATCCGT 137764 Query 23687 AAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTT 23746 ||||| | | | ||| | || ||| |||||| |||||||| ||||| Sbjct 137763 CGATCCAAGTCATCGCCCATTGCGCTTTCTTGGCAACACACGGGATTGTTTCGATTGCGC 137704 Query 23747 TTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACA 23806 |||||| | |||||| || || | || || ||||||| |||| |||||||| Sbjct 137703 GAAAGAGATGGTCTCTTTCTTTGTTGTCCTTGATGTAGGTATCAAGAAGTAGACTATACA 137644 Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866 | || ||||||||||| ||||| || || ||||| || || ||| | || || || | Sbjct 137643 TCTCCGAATGAATATTCTCAATCGCGATTTGAAATCCGTAGAAAGCACGCGCCTCCGATA 137584 Query 23867 ATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAG 23926 |||||||| | |||| || | ||| || || || |||||| || | Sbjct 137583 CCTGAACATCGGACATGAATCGAGATGCAAGATTCTCCAAGACGATGCCATCAGAGGCGG 137524 Query 23927 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTG-ATAATTTTTTCCAA 23985 | ||||| || | |||| || || || |||| ||| | || | ||| || | |||| Sbjct 137523 CGAAGAAGGCTAAGACATGCTTGATGAAGTGTCGTTC-GCCGTCGTTTAAATTCTCCCAA 137465 Query 23986 TCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || || | ||||| ||| ||||| || | |||||||| Sbjct 137464 TCGCGTCCGTCCTGTGATAGATCGACTTCCTCGGCAGTCCAAAA 137421 >seq17369 Length=42627 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 ||| | |||||| || ||||| ||| ||||| || |||||| ||||| ||||| Sbjct 24358 TTGGATATCATTCAAGAATCTAGCAGCCAAATTCTCCAAAACAATTCCATCTGATGCAGC 24299 Query 23928 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 ||| ||||| ||||||| ||||||||||||| || | |||||| ||| ||||| Sbjct 24298 AAAAAAAGCTAGAACATGAGTTATAAAATGTCTCTCTGAATCTGATAAAGTTTCCCAATG 24239 Query 23988 ATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | | ||| |||||| |||||| || ||| ||| ||||| Sbjct 24238 TTGCACATCCGTTGATAGATCAACCTCTTCAGCTG--CAAAA 24199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521368631396800