Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20hypochondriacus_20[genbank_20GCA_5F000753965.1_202014- 09-10] 117,340 sequences; 502,147,592 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq7582 286 3e-71 seq3496 143 2e-28 seq14104 141 7e-28 seq4947 136 3e-26 seq815 134 1e-25 seq14666 122 7e-22 seq2839 120 2e-21 seq6393 118 8e-21 seq90508 105 5e-17 seq7103 102 6e-16 seq109889 96.9 3e-14 seq5306 91.5 1e-12 seq77292 86.0 5e-11 seq10417 86.0 5e-11 >seq7582 Length=33282 Score = 286 bits (316), Expect = 3e-71 Identities = 496/708 (70%), Gaps = 34/708 (5%) Strand=Plus/Plus Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 ||||||||||||||| ||||| | | ||||| || | ||||| | || | |||| Sbjct 5982 ATTATCAAAATCTTCCCCTCCAAGATGAGTATCACCAGCAGTAGCCTTAACCTCAAAAAT 6041 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 || ||||||| | | || | ||||| || || ||||| | ||| || || || Sbjct 6042 CCCTTCTTCAATGGTGAGAATCGAAACATCGAAAGTACCTCCACCAAGATCGAATATCAG 6101 Query 518143 TACATTCATTTCTTTG----TCTTGG----TTTTTATCAAGACCATACGCAAAAGCAGCA 518194 ||||| ||||| ||| | || ||||| | |||||| |||| ||||||| Sbjct 6102 CACATT--TTTCTCACCCGATCTAGAACCCTTCTTATCCAAACCATAAGCAATAGCAGCA 6159 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || ||||||||||| ||||||||||| | |||| ||| ||||||||| || Sbjct 6160 GCAGTAGGCTCATTAATAATCCTCAAAACATTCAACCCAGAAATCGATCCTGCATCCTTT 6219 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 || ||||| ||||||||||| |||||||| ||||||||||| | ||| ||| |||| | Sbjct 6220 GTAGCTTGCCTTTGTGAATCATTAAAATAAGCAGGAACAGTTACAACACCAT-TGTTAAT 6278 Query 518315 TCT-TTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 518373 || | || | |||||| || ||| |||||||| |||||| |||||| ||||| Sbjct 6279 ACTCTGTCCTAAATAAGCTTCAGCGATTTCCTTCATTTTGGTTAAAACCATTGAAGAAAT 6338 Query 518374 TTGTTCTG--GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAAT-AT-GGTT 518429 | ||| | | ||| ||| ||| ||| || |||||| || | ||| || |||| Sbjct 6339 CTCTTCCGGAGCGAACATTTTTTG--TTCTCCTTTATATGAGAC--GATAATCATCGGTT 6394 Query 518430 TATTAC---CAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAAC--ACT 518484 ||| | || | || ||| ||||| ||||| ||||||| || ||||| || || Sbjct 6395 TATCGCCTTCACCGGGAACAACCTTAAACGGCCATAATTTCATGTCGGATTGTACTGAC- 6453 Query 518485 TTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 518544 || || || ||| || | ||||| || || |||| || || ||||| Sbjct 6454 --GG--ATCGGAA----NACCGATGAGACGTTTAGCGTCGAAAACGGTGTTTTGAGGATT 6505 Query 518545 AATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAAC 518604 ||||| |||||| ||| || || || || || | | |||| || || ||||| | || Sbjct 6506 CATTGCGACTTGATTTTTTGCGGCGTCGCCGATTAAACGTTCGGTGTCGGTAAACGCGAC 6565 Query 518605 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 518664 ||| ||||| ||||| | || ||||||||||| | ||| || || || | ||| | Sbjct 6566 ATACGATGGGGTTGTTCTGTTTCCTTGATCATTTGGAATGATCTCGACGCGGTCGTTTCG 6625 Query 518665 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 ||| |||||||||||||| | |||||||||||||| || ||||| || Sbjct 6626 CCAAACACCTACACAACTGTAGGTTGTTCCTAAATCGATTCCAATGGC 6673 >seq3496 Length=88706 Score = 143 bits (158), Expect = 2e-28 Identities = 142/184 (77%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| | || |||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 46819 CCATAGGAAAGAGCAGCGGCAGTTGGTTCATTAATAATTCTCTGGACATCTAGTCCAGCA 46760 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 |||||||| |||||||| || ||||||||||| | ||| || || || || |||||||| Sbjct 46759 ATTCTTCCAGCATCTTTCGTAGCTTGTCTTTGAGCATCATTGAAGTAAGCTGGAACAGTG 46700 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 | || || | || ||| ||| |||| ||||| ||| |||| |||||||| | Sbjct 46699 ACTACAGCTTTGGTAACTGTTTTTCCAAGGTAAGCCTCTGCAGTTTCCTTCATTTTTGTC 46640 Query 518357 AAAA 518360 |||| Sbjct 46639 AAAA 46636 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 || || | |||||| || ||||||||||||||||| ||| | | ||||||| || ||| Sbjct 46819 CCATAGGAAAGAGCAGCGGCAGTTGGTTCATTAATAATTCTCTGGACATCTAGTCCAGCA 46760 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 ||| | ||| ||| || |||||||| || || ||||| || || ||||| ||||| Sbjct 46759 ATTCTTCCAGCATCTTTCGTAGCTTGTCTTTGAGCATCATTGAAGTAAGCTGGAACAGTG 46700 Query 322364 ATAACTGCTTTATTAATAGGTTTT 322387 | || ||||| ||| | |||| Sbjct 46699 ACTACAGCTTTGGTAACTGTTTTT 46676 >seq14104 Length=24566 Score = 141 bits (156), Expect = 7e-28 Identities = 161/215 (75%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 518101 AAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT----- 518155 ||||| |||||| || || ||||| | |||||| ||||| |||||| |||| Sbjct 22391 AAGAGAAACATCAAAAGTACCCCCACCAAGATCAAAGATAAGAACATTCTTTTCACCAAC 22332 Query 518156 --TTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 518211 |||| || || |||||||||||||| |||| ||||||||||||||| || ||||| Sbjct 22331 ACTTGT---GGCCTTCTTATCAAGACCATAAGCAATAGCAGCAGCAGTTGGCTCGTTAAT 22275 Query 518212 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 518271 || | || ||||| | ||||| ||| ||| ||||||||||| ||||| | ||| || Sbjct 22274 GATACGCATCACATTCAAACCAGAGATTACTCCAGCATCTTTAGTAGCTTGACGTTGAGA 22215 Query 518272 ATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 || || || || ||||||||||||| || |||| Sbjct 22214 GTCATTGAAGTAGGCAGGAACAGTAACGACAGCAT 22180 Score = 118 bits (130), Expect = 8e-21 Identities = 319/482 (66%), Gaps = 5/482 (1%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGT-GACTTCAATTTGAGGGAC 517317 |||| ||||| | |||||||||||||| | ||||| || ||| |||||||| Sbjct 1381 GCAGAGACATTCAAGATACCATTGGCATCAATGTCAAAGCACNACAGTAATCTGAGGGAC 1440 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 ||||| | || || || || || | | |||| | |||| || || || | Sbjct 1441 ACCTCTAGGGGCTGGGGGAATGCCAGAAAGCTCAAATTTACCCAACAAGTTGTTGTCCCT 1500 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 || ||| ||| || || | | |||||| || ||| ||| || || || || Sbjct 1501 GGTCCTGGTTCTTTCTCCTTCATATACTTGGATCAATACACCAGGTTGGTTGTCAGAGTA 1560 Query 517438 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 ||||| || ||| || || || || || ||||| || |||| || Sbjct 1561 AGTTGAGAAAACTTGCTCCTTCTTGGTTGGGATAGTGGTGTTCCTTGGGATAAGGACAGT 1620 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | |||||| || || || | ||| || || |||||||||||||||| || | | Sbjct 1621 CATGACACCACCAGCAGTCTCAAGACCGAGGGAGAGAGGAGTGACATCAAGAAGCAAGAG 1680 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCAT 517616 | ||| | || || | || |||| ||||| |||| ||||| | ||||||||||| Sbjct 1681 GTCTTGCACCTTCTCGTTTCCTTCACCACTCAAGA-TAGCAGCTTGGACAGCAGCACCAT 1739 Query 517617 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TT 517675 | |||||||| |||||||| || | | ||| |||| |||||||| || |||| || Sbjct 1740 AAGCAACAGCCTCATCAGGGTTGATACTTTTGCAAAGTTCCTTACCATTAAAGAAATCTT 1799 Query 517676 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 | || || ||| |||||| ||||| | || ||||| ||||| | || | ||||| Sbjct 1800 GTAACAA-CTGTTGTACCTTGGGAATTCTAGTGGATCCACCAACAAGGACGACATCATGG 1858 Query 517736 AC 517737 || Sbjct 1859 AC 1860 Score = 102 bits (112), Expect = 6e-16 Identities = 160/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||||| |||||| || || || | ||| ||||| |||||||||||||| | || | Sbjct 23004 GTCATAACACCACCAGCAGTCTCAAGACCGAGAGAGAGAGGAGTGACATCGAGAAGCAAG 22945 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACC 517614 | | ||| | || || | || |||| ||||| |||| ||||| | ||||||||| Sbjct 22944 AGGTCTTGGACCTTCTCGTTTCCTTCACCACTCAAGA-TAGCGGCTTGGACAGCAGCACC 22886 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 517673 |||||||||||| ||||| || || | | ||| || | ||||| ||||| |||| Sbjct 22885 ATATGCAACAGCCTCATCCGGGTTGATACTTTTGCAAAGCTCCTTACCGTTGAAGAAATC 22826 Query 517674 TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCA 517717 ||| || || || ||||| ||||| | || ||||| ||| Sbjct 22825 TTGCAACAA-CTGCTGAACCTTGGGAATTCTAGTGGATCCACCA 22783 Score = 95.1 bits (104), Expect = 9e-14 Identities = 129/179 (72%), Gaps = 6/179 (3%) Strand=Plus/Plus Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCA 518185 ||||| ||||| |||||| |||| | | ||| || || ||||||||||| || Sbjct 3042 TCAAAGATAAGAACATTCTTTTCACCGACACTTGTGGCCTTCTTGTCAAGACCATAAGCG 3101 Query 518186 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 518245 | ||||||||| || || ||||||||||| | || |||||| | |||| || ||| Sbjct 3102 ATAGCAGCAGCGGTGGGCTCATTAATAATACGCATAACATTCAAGCCAGAGATGACTCCA 3161 Query 518246 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 ||||| || || || || | || ||||| || || || || |||||||| | ||| || Sbjct 3162 GCATCCTTGGTAGCCTGACGCTGAGAATCATTGAAGTAGGCTGGAACAGTGACAACAGC 3220 >seq4947 Length=56615 Score = 136 bits (150), Expect = 3e-26 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| | || |||||||||||| |||||||||||||||||| ||||| || || ||| Sbjct 32644 CCATAAGAAAGAGCAGCAGCAGTGGGTTCATTAATAATTCTCTGAACATCCAGTCCTGCA 32703 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||||| || |||||||| || |||||||| || | ||| || || || || ||||| || Sbjct 32704 ATTCTCCCAGCATCTTTTGTTGCTTGTCTCTGAGCATCATTGAAGTAAGCTGGAACGGTT 32763 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 | |||||| | || ||| ||| |||| ||||| ||| || | |||||||| | Sbjct 32764 ACAACGGCCTTGGTAACTGTTTTTCCAAGGTAAGCCTCTGCAGTCTCCTTCATTTTGGTC 32823 Query 518357 AAAATCATTGATGAAATTTGTTCTGGGGAATATTG 518391 |||| | | | |||||| || |||||||| Sbjct 32824 AAAACAAAGGCTCCAATTTGACTAGGAGAATATTG 32858 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 || || | |||||| || ||||| ||||||||||| ||| | ||||||| | || ||| Sbjct 32644 CCATAAGAAAGAGCAGCAGCAGTGGGTTCATTAATAATTCTCTGAACATCCAGTCCTGCA 32703 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 ||| | ||| ||| |||||||||||||| || ||||| || || ||||| || || Sbjct 32704 ATTCTCCCAGCATCTTTTGTTGCTTGTCTCTGAGCATCATTGAAGTAAGCTGGAACGGTT 32763 Query 322364 ATAACTGCTTTATTAATAGGTTTT 322387 | ||| || || ||| | |||| Sbjct 32764 ACAACGGCCTTGGTAACTGTTTTT 32787 >seq815 Length=81296 Score = 134 bits (148), Expect = 1e-25 Identities = 115/142 (81%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || || |||||||| || | ||| ||||||||||||||||| ||||| | || |||| Sbjct 5591 TTCTTGTCGAGACCATATGCGATAGCTGCAGCAGTTGGTTCATTGATAATGCGCATAACA 5532 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 ||||| |||||||| || |||||||| || || || | ||| |||||||| |||||| Sbjct 5531 TTAAGTCCAGCAATGACACCAGCATCTTTTGTAGCCTGACGTTGAGAATCGTTGAAATAT 5472 Query 518285 GCAGGAACAGTAATAACGGCAT 518306 ||||||||||| || || |||| Sbjct 5471 GCAGGAACAGTTATCACTGCAT 5450 Score = 95.1 bits (104), Expect = 9e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 || |||||||||||| || ||| || | |||| |||||| || || ||||| ||| Sbjct 2517 CATAAATAGTATTGGCAGGGTTAGCAACAACCTGATTTTTGGCAGCTTCACCAATGAGAC 2458 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 ||| || || || |||| || | || || || || | |||||||||||||| | | Sbjct 2457 GTTGAGTTTCAGTGAATGCTACCCAAGAAGGCGTAGTTCTGTTACCTTGATCATTTGTTA 2398 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | |||||||| ||| | |||||| || |||||| | |||||||| ||||| | Sbjct 2397 TGATTTCAACACGGTCATGCTCCCATACTCCCACACAAGAGTATGTTGTTCCCAAATCGA 2338 Query 518703 TACCAATAGC 518712 | || ||||| Sbjct 2337 TTCCTATAGC 2328 >seq14666 Length=16394 Score = 122 bits (134), Expect = 7e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 || || ||||| ||||||| |||| || || ||||| | ||| || || ||||| || Sbjct 16390 TTAGCAGCATCACCAATCAATCGTTCAGTATCCGTAAAAGCAACGTAAGAGGGAGTCGTT 16331 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 | ||| ||||||||||||||||||||||||||| || ||| ||||||||| |||||||| Sbjct 16330 CTATTCCCTTGATCATTCGCAATAATTTCAACTCTATCATGTTGCCATACTCCTACACAT 16271 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || || || | |||||| ||||| || Sbjct 16270 GAGTATGTCGTCCCAAGATCAATTCCAATCGC 16239 >seq2839 Length=53906 Score = 120 bits (132), Expect = 2e-21 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||| |||| ||||| |||| ||||| |||||||||||||| ||||| | || |||||| Sbjct 44865 TTACCAAGCCCATAGGCAATTGCAGCCGCAGTTGGTTCATTGATAATGCGCATGACATTA 44924 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || || ||||| | || ||||||||||| ||||| | |||||||| |||||||| || Sbjct 44925 AGTCCTGCAATGGTACCAGCATCTTTAGTTGCTTGCCGCTGTGAATCATTAAAATAGGCT 44984 Query 518288 GGAACAGTAATAACGGCAT 518306 || ||||| | || |||| Sbjct 44985 GGCACAGTGACTACAGCAT 45003 >seq6393 Length=62329 Score = 118 bits (130), Expect = 8e-21 Identities = 157/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 |||||||||| || || | |||||||||||||| ||||| || || | | |||||||| Sbjct 535 TATCAAGACCGTAAGCCATGGCAGCAGCAGTTGGCTCATTGATGATACGAACAACATTAA 594 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 |||||||||| ||| |||||||||||||| | || |||||||| || || || | Sbjct 595 GACCAGCAATGGCTCCCGCATCTTTAGTGGCCTTTCGCTGTGAATCAGAGAAGTAGGCTG 654 Query 518289 GAACAGTAATAACGGCATCAGTTACTTCTT--TACCAATATAAGCGCTTGCCGTTTGTTT 518346 | ||||| | ||| || | || |||| ||||| | |||| || | | ||| Sbjct 655 GCACAGTTACAACAGCGT--TTTTGATCTTGCTACCATAAAAAGCCTCGGCAATATCTTT 712 Query 518347 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 ||| || ||| || ||||||||| || | |||||| Sbjct 713 CATCTTCATTAGAACCATTGATGATATCTCTTCTGG 748 >seq90508 Length=363 Score = 105 bits (116), Expect = 5e-17 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || |||| |||||| || |||| ||||||||| || |||||||||||||| | || Sbjct 57 TTCTTCTCAAAACCATAAGCCAAAGAAGCAGCAGTCGGCTCATTAATAATTCTAAGTACT 116 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 | || |||||||| | |||||||| || || ||| ||||| || || ||||| || Sbjct 117 TCCAGCCCAGCAATACGGCCTGCATCCTTTGTTGCTGTCCTTTGAGAGTCATTAAAGTAA 176 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTT 518315 ||||| || |||| || || | ||||||| Sbjct 177 GCAGGTACTGTAACCACTGCCTTTGTTACTT 207 >seq7103 Length=48943 Score = 102 bits (112), Expect = 6e-16 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 518500 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTT--GGATTAATTGCAGCTTGA 518557 ||||||||| | |||||| | |||||||| || | ||| ||||| | | |||||| Sbjct 14924 TCTACCAATAAGTCGTTTAACGTCAAAAATTGT--TCGTTCAGGATTTAAAGATGCTTGA 14981 Query 518558 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 518617 | ||||| || |||||||||| ||| || || || || | || |||| || || Sbjct 14982 TTCTTGGCAGCTTCTCCAATCAACCTTTCAGTATCAGTGAAAGCTACCCATGAAGGTGTG 15041 Query 518618 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACA 518677 | | |||||||||||||| || |||||||| || | |||| || |||| || ||| Sbjct 15042 ATCCTGTTACCTTGATCATTGGCTATAATTTCCACATGCCCATCTTTATATACTCCAACA 15101 Query 518678 CAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 || | | || ||||| | ||| |||||||| Sbjct 15102 CATGAATATGTCGTTCCCAGATCTATACCAAT 15133 >seq109889 Length=584 Score = 96.9 bits (106), Expect = 3e-14 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 668858 AAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGTACA 668917 ||||||||||| || ||||| || |||||||||||||| || ||| | ||||||||||| Sbjct 222 AAAGAAGGTCGCATAAGAGGCAACTTGATGGGAAAACGAGTGGATTTTTCTGCACGTACT 163 Query 668918 GTTATTACTTCTGATCCCAATAT 668940 |||||||| ||||||| ||||| Sbjct 162 GTTATTACACCTGATCCAAATAT 140 >seq5306 Length=221055 Score = 91.5 bits (100), Expect = 1e-12 Identities = 175/256 (68%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 |||||| ||||||||| | ||| | ||| || || |||| |||| || | | Sbjct 19622 AATCTT-ACCTCCCAAGTGAGTGTCTCCGTTGGTTGCAAGAACTTCAAAAACACCGTTGT 19680 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| | ||| | | | ||||| ||||||||||| | ||||| | ||| | ||| Sbjct 19681 CAATGGTCAAGACACTGACATCGAATGTTCCACCACCAAGGTCAAAGACAAGGATGTTCT 19740 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 | || | | || || | ||||| |||| || || || ||||||||||||| Sbjct 19741 TCTCACCACCCC---TCTTGTCTAACCCATAGGCAATGGCTGCCGCTGTTGGTTCATTAA 19797 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 |||| || ||||| | ||||||||| ||||||||||||| || ||||| || || | Sbjct 19798 TAATCCTAGCGACATTCAAACCAGCAATGATTCCTGCATCTTTGGTAGCTTGCCTCTGGG 19857 Query 518271 AATCGTTAAAATATGC 518286 ||| || ||||| || Sbjct 19858 CATCATTGAAATAAGC 19873 >seq77292 Length=307 Score = 86.0 bits (94), Expect = 5e-11 Identities = 123/170 (72%), Gaps = 5/170 (3%) Strand=Plus/Minus Query 517565 AGTTT-TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 ||||| |||| | || |||| ||||| | | |||||| |||||||||||| ||||| Sbjct 247 AGTTTCTTCACCTCCTTCACCACTAAGAACACCACCTTGAACAGCAGCACCATAAGCAAC 188 Query 517624 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT--TTGAAAGA 517681 ||| |||||||| |||||| | ||| | | |||||| | || |||| || || | Sbjct 187 AGCCTCATCAGGGTTAACACCCTTATTAGGCTCTTTACCCTCAAAGAAATCCTTCAA--A 130 Query 517682 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 || ||| | ||||||||| | || ||||||||| | |||||| || Sbjct 129 AGCTGTTGAATCTTAGGAATCCTAGTGCTTCCTCCAACAAGTACAATCTC 80 >seq10417 Length=117525 Score = 86.0 bits (94), Expect = 5e-11 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 681617 AAATGACACATTTTTTATTTTATGGGCCTCCAGGAACAGGAAAAACTTCTGCTATTTTAG 681676 || || | ||| || | ||||||| |||||||||||||| ||||| || | ||||| | Sbjct 78607 AACTGCCGCATCTTCTGCTTTATGGACCTCCAGGAACAGGCAAAACGTCCACAATTTTGG 78548 Query 681677 CGATGGGTAGAGAAATTTTCAAGGAA-CATTTTCAAAATAGAGTTATTGAATTCAATGCT 681735 || | | ||| |||| ||| |||| || ||||| |||| || |||| | |||||| Sbjct 78547 CGGTTGCTAG-GAAACTTTATGGGAATCAGTTTCATAATATGATTCTTGAGCTTAATGCT 78489 Query 681736 TCTGATGACAGAGGAATTAATGCTGTTCG 681764 |||||||| | || ||| | | |||||| Sbjct 78488 TCTGATGAACGTGGTATTGACGTTGTTCG 78460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3774999602682040