Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20hypochondriacus_20[genbank_20GCA_5F000753965.1_202014- 09-10] 117,340 sequences; 502,147,592 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7582 322 6e-83 seq14104 275 8e-69 seq21423 248 1e-60 seq815 147 3e-30 seq6393 132 6e-26 seq7113 114 2e-20 seq2839 113 6e-20 seq14666 104 3e-17 seq8005 98.7 1e-15 seq5306 95.1 2e-14 seq99321 87.8 2e-12 seq3496 87.8 2e-12 >seq7582 Length=33282 Score = 322 bits (356), Expect = 6e-83 Identities = 496/703 (71%), Gaps = 20/703 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||| || || | || ||||| || || || || || || ||||| || || Sbjct 5985 ATCAAAATCTTCCCCTCCAAGATGAGTATCACCAGCAGTAGCCTTAACCTCAAAAATCCC 6044 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||||| | | | ||||||||| || ||||| ||||| || || || || || || Sbjct 6045 TTCTTCAATGGTGAGAATCGAAACATCGAAAGTACCTCCACCAAGATCGAATATCAGCAC 6104 Query 7576 GTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 || | || | | | |||||||| | ||| || || ||||| || || || Sbjct 6105 ATTTTTCTCACCCGATCTAGAACCCTTCTTATCCAAACCATAAGCAATAGCAGCAGCAGT 6164 Query 7630 TGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 || ||||||||||| | || ||| |||| |||| ||| | | | ||||| || || | Sbjct 6165 AGGCTCATTAATAATCCTCAAAACA-TTCAACCCAGAAATCGATCCTGCATCCTTTGTAG 6223 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 |||| | ||| ||||| ||||| || || || || ||||| || | | | | ||| Sbjct 6224 CTTGCCTTTGTGAATCATTAAAATAAGCAGGAACAGTTACAACACCATTGTTAATACTCT 6283 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808 || | ||| | ||| ||||| || ||||||||||| | |||||| || |||||||||| Sbjct 6284 GTCCTAAATAAGCTTCAGCGATTTCCTTCATTTTGGTTAAAACCATTGAAGAAATCTCTT 6343 Query 7809 CAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG 7868 | | || ||| ||| ||| || ||| | || |||||| |||||||| | Sbjct 6344 CCGGAGCGAACATTTTTTGTTCTCCTTTATATGAGACGATAATCATCGGTTTATCGCCTT 6403 Query 7869 CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG-TCCGAA 7927 ||||||| | ||||||| ||| ||| |||||| ||| ||| | ||| || || ||| Sbjct 6404 CACCGGGAACAACCTTAAACGGCCATAATTTCATGTCGGATTGTA-CTGACGGATCGGAA 6462 Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 | ||||| ||||| || || || ||||| ||||||| || ||||| || | Sbjct 6463 NA-------CCGATGAGACGTTTAGCGTCGAAAACGGTGTTTTGAGGATTCATTGCGACT 6515 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 || || || || ||||| ||||| | |||||| | || ||||||||||| |||||| Sbjct 6516 TGATTTTTTGCGGCGTCGCCGATTAAACGTTC---GGTGTCGGTAAACGCGACATACGAT 6572 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 ||||| |||| || ||||| || || | ||| || || |||||||||||| |||| || Sbjct 6573 GGGGTTGTTCTGTTTCCTTGATCATTTGGAATGATCTCGACGCGGTCGTTTCGCCAAACA 6632 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTT 8150 || || || || |||||||||||||| || || || |||| Sbjct 6633 CCTACACAACTGTAGGTTGTTCCTAAATCGATTCCAATGGCTT 6675 Score = 185 bits (204), Expect = 1e-41 Identities = 369/555 (66%), Gaps = 37/555 (7%) Strand=Plus/Plus Query 6820 TTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGAT 6879 ||| |||||||| ||||| || |||| || |||||||| || ||||| || Sbjct 3280 TTCCCCTTCATACACTTTGATCATCACACTAGTCTGATTATCCGAATAAGTAGAGAAAAT 3339 Query 6880 TTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACC 6939 ||||| || |||| ||| || || ||||||||||| |||| ||||||| |||||| Sbjct 3340 CTGTTCCTTTTTAGTTGGGATTGTTGTATTTCTCGGTATAAGAACAGTCATAACACCACC 3399 Query 6940 CATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA---GGTCTTGAAC 6996 ||| |||| ||| | ||||| ||||| || || |||||||| | |||||||| Sbjct 3400 AGCAGTCTCGATTCCTAAAGACAACGGTGTTACATC---GAGTAACAAAAGCTCTTGAAC 3456 Query 6997 AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 || ||| | | || || || || Sbjct 3457 T-------------------TTCTGAT------------CNNNNNNNCATACGCAACAGC 3485 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTG 7116 ||||||||| || || | ||| || || || ||||| || |||| ||| | ||| Sbjct 3486 CTCATCGGGATTTATGCTCTTACAAAGCTCCTTTCCGTTGAAGAAATCTTGTAAAAGTTG 3545 Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTT 7176 ||| | ||| || || | ||||| ||||| || || || || |||| | ||| || Sbjct 3546 TTGGACTTTGGGAATCCTCGTCGAGCCACCTACTAAGACAATGTCATCGATTTTACTCTT 3605 Query 7177 ATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 ||||||||| | || | || |||||||| ||||||||||| | ||| || || Sbjct 3606 ATCGATCTTGGCATCCCTTAGACAGGACTCGACAGGATCCATACATTTTCTGAATAAATC 3665 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 || || |||||||| || | |||||| || || | || |||||| || | || ||| | Sbjct 3666 GATGCAGAGTTCCTCGAATCTTGCACGTGTGATTGTTGCATAGAAGTCGATCCCTTCGAA 3725 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTC 7356 ||| ||||| || || |||||||| || | || ||||||| ||| ||||| || ||||| Sbjct 3726 TAAGGAATCGATCTCGATGGTTGTCTGAGTGGTTGAAGATAGCGTACGCTTAGCTCGCTC 3785 Query 7357 ACACGCCGTTCGTAA 7371 ||| || |||| ||| Sbjct 3786 ACAAGCTGTTCTTAA 3800 >seq14104 Length=24566 Score = 275 bits (304), Expect = 8e-69 Identities = 437/624 (70%), Gaps = 2/624 (0%) Strand=Plus/Minus Query 6524 TAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTCATCTTTA 6583 |||||||| | | ||||||| || || ||||| ||| || | ||||| ||| | || Sbjct 23406 TAGTTTTCCAAAGCATTCTTGGCTTCAACCTTCTTCTTGTGTTCCTCATCCTCAGCCTTG 23347 Query 6584 TACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCA 6643 ||||| || || || || ||||||||||| || || || || |||| ||| ||||| || Sbjct 23346 TACTTCTCAGCCTCCTGCACCATCTTTTCGATCTCATCCTTTGATAGTCTACCCTTGTCG 23287 Query 6644 TTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAA 6702 || ||||| || ||||| ||| | | || | || ||| || |||||| || ||||| Sbjct 23286 TTGGTAATGGTGATCTTGTTCTTCTGT-CCGGTGGTCTTGTCCTCAGCAGAGACGTTCAA 23228 Query 6703 AATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGC 6762 |||||||| ||||||| ||||| | ||||| || || || |||||| || || | Sbjct 23227 GATACCATTGGCATCAATGTCGAAGCAAACATTGATCTGAGGAACACCCCTAGGAGCTGG 23168 Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822 ||||| || | | |||||| |||| | || |||| ||| | | | | | | ||| Sbjct 23167 GGGAATGCCAGAGAGCTCAAATTTACCCAACAAGTTGTTGTCCTTGGTCCTGGTTCTTTC 23108 Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882 ||||||||||||| ||| ||| | || || || || |||||||| | || Sbjct 23107 TCCTTCATAGACTTGAATCAACACACCCGGCTGGTTGTCAGAGTAAGTTGAGAACACCTG 23048 Query 6883 TTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCAT 6942 || ||||| | || || || || || || || |||| ||||||| |||||| Sbjct 23047 CTCCTTCTTTGTGGGGATTGTGGTGTTCCTTGGGATAAGGACAGTCATAACACCACCAGC 22988 Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTC 7002 ||| || || || ||||| ||||| || || || | || || |||||||| || || Sbjct 22987 AGTCTCAAGACCGAGAGAGAGAGGAGTGACATCGAGAAGCAAGAGGTCTTGGACCTTCTC 22928 Query 7003 GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATC 7062 ||| |||||||| | ||||| ||||||||||| | || || ||||| || |||||||| Sbjct 22927 GTTTCCTTCACCACTCAAGATAGCGGCTTGGACAGCAGCACCATATGCAACAGCCTCATC 22868 Query 7063 GGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAAT 7122 ||||| || |||| || || |||||||| || |||| |||| || |||| Sbjct 22867 CGGGTTGATACTTTTGCAAAGCTCCTTACCGTTGAAGAAATCTTGCAACAACTGCTGAAC 22808 Query 7123 TTTCGGGATTCGTGTCGATCCACC 7146 || || |||| || |||||||| Sbjct 22807 CTTGGGAATTCTAGTGGATCCACC 22784 Score = 158 bits (174), Expect = 2e-33 Identities = 277/401 (69%), Gaps = 22/401 (5%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT-TT 7593 ||||||||||| ||||| ||||| || ||||| || || || ||| | || | | || Sbjct 22387 GAAACATCAAAAGTACCCCCACCAAGATCAAAGATAAGAACATTCTTTTCACCAACACTT 22328 Query 7594 GT-----TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGA 7648 || ||||||| ||||| || || ||||| || || ||||| || ||||| ||||| Sbjct 22327 GTGGCCTTCTTATCAAGACCATAAGCAATAGCAGCAGCAGTTGGCTCGTTAATGATACGC 22268 Query 7649 AG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 | ||| |||| |||| || | | |||||||| || ||||| ||||| || || || Sbjct 22267 ATCACA-TTCAAACCAGAGATTACTCCAGCATCTTTAGTAGCTTGACGTTGAGAGTCATT 22209 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 |||||||| || || || ||||| || | | || | ||| || || | || || Sbjct 22208 GAAGTAGGCAGGAACAGTAACGACAGCATTTTTCACAGTAGAACCAAGGTAAGCCTCAGC 22149 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGAT-------------GAAATCTCTTCAGCCG 7814 || || ||||| |||||||||||||| ||| || || || ||||| | Sbjct 22148 AATCTCCTTCATCTTGGTAAGAACCATGGATNNNNNNNNNNNNNGAGATTTCCTCAGCAG 22089 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAAC-TTCAATCATGGGTTTATCCGCAGCACCG 7873 ||||||| ||| ||||| || | | || |||||||||| || || ||| ||| Sbjct 22088 CAAACTGCTTCTCCTCACCCTTGTAGTTGACAANCAATCATGGGCTTGTCACCAGGACCT 22029 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGAC 7914 || | |||||| ||| ||| ||| ||||| ||||||| Sbjct 22028 GGAACAACCTTGAACGGCCAGAGTTTAATATCAGCTTGGAC 21988 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| || ||||| || |||||||| || || || || |||||||||||||| | | Sbjct 3081 TTCTTGTCAAGACCATAAGCGATAGCAGCAGCGGTGGGCTCATTAATAATACGCATAACA 3140 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||| ||||| || | | ||||| || || || || || || ||||| || |||||| Sbjct 3141 TTCAAGCCAGAGATGACTCCAGCATCCTTGGTAGCCTGACGCTGAGAATCATTGAAGTAG 3200 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || || || || || |||| | | || | ||| || || | || || || || Sbjct 3201 GCTGGAACAGTGACAACAGCGTTCTTCACGGTTGAACCAAGGTAAGCCTCGGCAATCTCC 3260 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825 ||||| |||||||||||||| || || || || ||||| |||||||| ||| Sbjct 3261 TTCATCTTGGTAAGAACCATGGAGGAGATTTCCTCAGCAGCAAACTGCTTC 3311 Score = 93.3 bits (102), Expect = 5e-14 Identities = 133/187 (71%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 7953 CATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012 || ||||||| ||||| | ||||||||||| ||| ||||| || || || ||||| | Sbjct 8563 CACCAAAAACGGTGTTAATAGGGTTCATGGCGACTTGATTCTTAGCTGCATCACCGATCA 8622 Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGT 8072 | ||| | || ||||| || ||||| || || ||||| | || || ||||| | Sbjct 8623 ACCTTTCGGAA---TCGGTAAAAGCAACGTAAGACGGCGTCGTCCTGTTACCCTGGTCAT 8679 Query 8073 TCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTA 8132 | ||||| || || || || |||| |||||| || || || || || || || || || | Sbjct 8680 TAGCAATGATCTCGACCCGATCGTGTTGCCATACTCCAACACAAGAGTATGTAGTACCAA 8739 Query 8133 AATCAAT 8139 ||| || Sbjct 8740 GATCGAT 8746 >seq21423 Length=2428 Score = 248 bits (274), Expect = 1e-60 Identities = 441/637 (69%), Gaps = 6/637 (1%) Strand=Plus/Plus Query 6524 TAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTCATCTTTA 6583 ||||| || || ||||||| ||||||||||| ||| || || ||||||||| |||| Sbjct 1125 TAGTTCTCAAGGGCATTCTTAGCCTCGACCTTCTTCTTGTGCTCTTCATCTTCTGATTTA 1184 Query 6584 TACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCA 6643 || || || || || || ||||| | ||||| ||||| || || | ||| ||||| ||| Sbjct 1185 TATTTCTCTGCTTCCTGCACCATTCTCTCAATCTCTTCCTTTGACAGTCTACCCTTGTCA 1244 Query 6644 TTCGTAATCGTAATCTT-TTCGGATTTACCC-GAGGCCTTATCTTCAGCACTTACATTCA 6701 || || || || ||||| ||| | | ||| | | ||| || ||||| ||||| | Sbjct 1245 TTTGTGATTGTGATCTTGTTCT--TCTGCCCAGTAGTCTTGTCCTCAGCTGAGACATTGA 1302 Query 6702 AAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGG 6761 ||||||||||||||||| ||||| | ||||| || || || |||||| ||||| | Sbjct 1303 GAATACCATTTGCATCAATGTCGAAGCAGACATTGATCTGAGGGACACCCCTTGGTGCAG 1362 Query 6762 CTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTAT-CCGTCGCCTTCTTACGT 6820 ||||| || || | || || | || | || |||| | ||| |||| || | | Sbjct 1363 GAGGAATGCCTGTAAGCTCGAACTTGCCTAACAAGTTGTTGTCCCGAGTCCTTGTT-CTT 1421 Query 6821 TCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATT 6880 || |||||||| || | ||| ||| | ||||| ||||| |||||||| | Sbjct 1422 TCTCCTTCATAAACCTGAATCAACACACCCGGTTGGTTATCCGAGTATGTTGAGAACACC 1481 Query 6881 TGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCC 6940 || |||||||| | ||||| || || || || || || | ||||||| |||||| Sbjct 1482 TGCTCTTTCTTTGTAGGAATGGTGGTGTTCCTTGGGATGAGAACAGTCATAACACCACCA 1541 Query 6941 ATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGAT 7000 ||| || | ||||||||| | || || || ||||| || | || |||||| || Sbjct 1542 GCAGTCTCCAATCCAAGAGATAATGGAGTGACATCCAACAGAAGCAAGTCTTGCACTTTC 1601 Query 7001 TCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCA 7060 || |||||||| || || ||||| || || || | || || || || || |||||| Sbjct 1602 TCATTCCCTTCTCCACACAAAATGGCAGCCTGCACAGCTGCACCATAAGCTACTGCCTCA 1661 Query 7061 TCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGA 7120 |||||||| || | || || || || || ||||| |||| | || |||||| Sbjct 1662 TCGGGGTTGATACTCTTGCAAAGCTCCTTTCCATTAAAGAAATCTTGCAGCAACTGTTGA 1721 Query 7121 ATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157 | ||| || || | ||| |||||||| || | |||| Sbjct 1722 ACTTTGGGAATCCTTGTAGATCCACCAACAAGCACGA 1758 Score = 111 bits (122), Expect = 2e-19 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 ||||||||||||| | ||| |||||||| || || || ||||| || || ||||| ||| Sbjct 2137 AATCTTCACCACCAAGGTGAGTATCCCCAGCAGTAGCCTTGACCTCGAAAATACCCTCTT 2196 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 |||| | |||||||| |||||||| ||||||||||| || |||||||| Sbjct 2197 CAATTGTCAACAACGACACATCAAAAGTACCACCACCAAGATCAAAAAT 2245 >seq815 Length=81296 Score = 147 bits (162), Expect = 3e-30 Identities = 460/706 (65%), Gaps = 21/706 (3%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 ||||| || || || || ||||| |||||||| || || || || |||||||| ||| Sbjct 6161 GCCCCATAGGCAACTGCTTCATCAGGGTTAATGTTTCTACAAAGCTCCTTACCGTTGAAA 6102 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 |||||| ||||| |||||||| | || || | ||| || ||||| || | || || Sbjct 6101 TAATCCTGCAACATCTGTTGAATGTAAGGAATCCTTGTTGAACCACCAACAAGGACAATG 6042 Query 7160 TCATTCACTT--TCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217 |||| | | || |||| | ||||||| |||| || || || || || || | Sbjct 6041 TCATGAATATCATCC-TTTACC-ATCTTTGTGTCTTTCAGACATTGATCAACTGGATCAA 5984 Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277 |||| || | || || |||||| || ||| ||||| ||||| ||||| | || Sbjct 5983 TACACTTCCTAAATAAATCCATATTCAACCTCTCGAAACGAGCACGAGTAATAGTTGATG 5924 Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337 |||||| | || || | | ||||||| || | |||| | || || | Sbjct 5923 TGAAATCCATACCTTCACAAAGGCAATCAATCTCGACACAAGTTTCAAGAGCAGATGAAA 5864 Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397 ||| || || | |||| || | || || | | ||| || | |||||| | Sbjct 5863 GGATTCTTTTGGCTCTCTCAGCAGCTGATCTCAACCTTCCAAGTGCTCTTGGGTTATCAT 5804 Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAA 7456 ||| ||| |||| | | ||||||||| |||| | || | | | | || Sbjct 5803 TAATGTCTACATTATTAGTCCTTTTAAACTCCTTCACAAAA-TAACTCACCAAATTCATG 5745 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || |||||| ||||||| | || ||||| || | ||||| |||||||| | ||| Sbjct 5744 TCTAAATCTCCACCACCTAGATGAGTATCACCACTTATTGCTTTTACTTCAAAAACACCA 5685 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || | || || ||||||||||| || |||||||| || ||||| | | || Sbjct 5684 CGTTGTACACATACTAAAGAAACATCAAATGTGCCACCACCAAGATCAAATACTAATATA 5625 Query 7577 T------TCGTATCGTCGTCT-TTG--------TTCTTATCGAGACCGTACGCGATAGCC 7621 | | ||| | || ||| ||||| |||||||| || |||||||| Sbjct 5624 TGTTTTTTGCTATTATTATCACTTGATGAAAGCTTCTTGTCGAGACCATATGCGATAGCT 5565 Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681 || || ||||||||||| ||||| || | | || || |||||||| | |||||| Sbjct 5564 GCAGCAGTTGGTTCATTGATAATGCGCATAACATTAAGTCCAGCAATGACACCAGCATCT 5505 Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTA 7727 || || || || ||||| |||||||| || || || || || |||| Sbjct 5504 TTTGTAGCCTGACGTTGAGAATCGTTGAAATATGCAGGAACAGTTA 5459 >seq6393 Length=62329 Score = 132 bits (146), Expect = 6e-26 Identities = 213/306 (70%), Gaps = 15/306 (5%) Strand=Plus/Plus Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 |||||| || ||| |||||||||||||| || ||||| | |||||| || | || | Sbjct 440 TTCAATAGCTACCAATGAAACATCAAACGTCCCTCCACCAAAGTCAAATATCAAAACAGT 499 Query 7579 CGTATCGTC------GTCTTT-GTTCTTATCG--------AGACCGTACGCGATAGCCGC 7623 || | | |||| | ||| ||||| |||||||| || || || || Sbjct 500 TTTAGCTCCAGCACTGTCTGTAGTTATTATCTTAGTATCAAGACCGTAAGCCATGGCAGC 559 Query 7624 CGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTT 7683 || ||||| ||||| || ||||||| | || || |||||||| | | |||||||||| Sbjct 560 AGCAGTTGGCTCATTGATGATACGAACAACATTAAGACCAGCAATGGCTCCCGCATCTTT 619 Query 7684 CGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 || || | ||| || ||||| |||||||| || || ||||| || |||| ||| Sbjct 620 AGTGGCCTTTCGCTGTGAATCAGAGAAGTAGGCTGGCACAGTTACAACAGCGTTTTTGAT 679 Query 7744 TTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAAT 7803 || |||| | | | || || ||||||||||| || | |||||||| ||||| || Sbjct 680 CTTGCTACCATAAAAAGCCTCGGCAATATCTTTCATCTTCATTAGAACCATTGATGATAT 739 Query 7804 CTCTTC 7809 |||||| Sbjct 740 CTCTTC 745 >seq7113 Length=4078 Score = 114 bits (126), Expect = 2e-20 Identities = 291/435 (67%), Gaps = 10/435 (2%) Strand=Plus/Minus Query 115369 CCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACCTGGAAGTAACCCTCTCTTT 115428 ||||||||||| || | ||| || || ||| || || | |||||| | ||| Sbjct 593 CCTTCATCTCGTGAGATTAATTCGTTTGAGAATGTTAATCCGGGCATTAACCCGCGTTTT 534 Query 115429 TTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACACACGCAAAG 115488 || | ||| ||||| | || ||||| || |||||||| || ||||||||||| || || Sbjct 533 TTAAGCCAGAAAATCGAGCAGAAACTTCCGGAGAAGAAAATCCCTTCAACACAAGCGAAA 474 Query 115489 GCTAATAAACGTTCAGCAAATGGTCGTTTCTTATCAAACCACTTCATAGCCCATTTCGCC 115548 || | ||| | || || || ||| | ||| | ||| | | ||||| ||| | Sbjct 473 GCAATTAATCTTT---CANAT--TCGGCAC-CATCGATCCATCTTAAGGCCCA-GTCGGC 421 Query 115549 TTTCTT-TCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTTTCTTTTCGCTAGA 115607 |||||| | | ||| || ||||||| |||||| ||||||| || | |||| ||| Sbjct 420 TTTCTTCTTTACACAAGGGATTGTTTCAATTGCACGGAATAATCGTGTTTTTTGAACAGA 361 Query 115608 ATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGTACCATTTCATTGTG 115667 | |||||| || | |||| ||| | ||| |||| || | ||||| || | Sbjct 360 GTCTTTTATGTAGGTTTCTAAGAGGAGAGAATACATTTCGGAATGGATGTTTTCAATG-G 302 Query 115668 AGA-TTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCATCTGCAAAATTAT 115726 || ||| || | ||||| | || || || | | ||| || || | ||| || Sbjct 301 CGATTTGGAAGCCGTAAAACGCACGGGCTTCAGAGACTTGAATCTCTTTCATGAAACGAT 242 Query 115727 TATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGCTAAAATATATTTTA 115786 || | |||||||| ||| |||||||||||| ||||||| ||||| | || | | | Sbjct 241 TAGCAAGATTTTCAAGAACAATACCATCAGAAGCAGCAAAGAAAGCAAGAACGTGGGTAA 182 Query 115787 TAAAATGTTTTTCAT 115801 | ||||||| ||||| Sbjct 181 TGAAATGTTGTTCAT 167 >seq2839 Length=53906 Score = 113 bits (124), Expect = 6e-20 Identities = 247/368 (67%), Gaps = 8/368 (2%) Strand=Plus/Plus Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAG 7654 ||||| | || || || || || || ||||| ||||||||||| ||||| || | |||| Sbjct 44863 TCTTACCAAGCCCATAGGCAATTGCAGCCGCAGTTGGTTCATTGATAATGCGCATGACA- 44921 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || || ||||| || | |||||||| || ||||| || || ||||| ||||| ||| Sbjct 44922 TTAAGTCCTGCAATGGTACCAGCATCTTTAGTTGCTTGCCGCTGTGAATCATTAAAATAG 44981 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || || || || || || | | || ||| | || || || | || || | || Sbjct 44982 GCTGGCACAGTGACTACAGCATTTTTCACATTCATGCCAAGGTAGGTCTCTGCTGTCTCC 45041 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCG 7834 ||||| || | || ||||| || || ||||| || | |||| | ||| ||| || Sbjct 45042 TTCATCTTCATCAGGACCATTGAAGATATCTCCTCGGGAACAAATTTCTTCTCTTCTCCT 45101 Query 7835 TTAAAATCAACTTCAATCATGGGTTTA------TCCGCAGCACCGGGGATAACCTTATAC 7888 || | || |||| ||||||||| || | || | | ||||||||| | Sbjct 45102 TTGTAGGTGACCACAATTATGGGTTTAGTATTTTCAGTAGAGTCCGCAATAACCTTAAAA 45161 Query 7889 GACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGC 7948 | ||| ||| || || | || || || || | |||| ||| || ||||| | | Sbjct 45162 GGCCAGAGTTTTATGTCATTCTGCACTGTTTCATCAGTAAACCGTCTCCCAATAAGCCTC 45221 Query 7949 TTTGCATC 7956 || ||||| Sbjct 45222 TTCGCATC 45229 >seq14666 Length=16394 Score = 104 bits (114), Expect = 3e-17 Identities = 118/158 (75%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || || || || || | |||||| ||| ||||||| || ||||| || || Sbjct 16393 TTCTTAGCAGCATCACCAATCAATCGTTCAGTAT---CCGTAAAAGCAACGTAAGAGGGA 16337 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 ||||||| ||||||||| || |||||||||||||| || | || | |||||| || || Sbjct 16336 GTCGTTCTATTCCCTTGATCATTCGCAATAATTTCAACTCTATCATGTTGCCATACTCCT 16277 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || || || | |||||| || || || Sbjct 16276 ACACATGAGTATGTCGTCCCAAGATCAATTCCAATCGC 16239 >seq8005 Length=94463 Score = 98.7 bits (108), Expect = 1e-15 Identities = 217/321 (68%), Gaps = 6/321 (2%) Strand=Plus/Minus Query 11326 CGGTTTGTTGCACCTATAACAACAATTTCAGTTTCATTCTCGAAACCATCCATTTCTGTT 11385 || || |||||| | | ||||| ||| | || | ||| || |||||||| || || Sbjct 12473 CGATTAGTTGCAGCAACAACAATAATACCGGTGTTTCCCTCAAAGCCATCCATCTCAGTC 12414 Query 11386 AATAATTGGTTAATTGTTTGTTCACGCTCATCGTTTGCCGCAAACCCATTCA--TACTTC 11443 | | || || | ||| ||||| | ||||| ||| | | || |||| ||| || Sbjct 12413 AGAAGCTGATTCAGTGTCTGTTCTCTTTCATCATTTCCTCCT--CCAATTCCAGTACCTC 12356 Query 11444 TTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTG 11503 ||| | | || | |||||||||||||| | ||||| |||||| || |||||| || Sbjct 12355 TTTGCCTCCCCACTGCATCAATTTCATCAACAAAGACAATACAAGGAGCATTTTCCTTTG 12296 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 || | || | ||||| ||||| ||| || || || |||||||||||||| || Sbjct 12295 CCTTCTTGAAAAGGTCACGCACTCTAGATGCTCCGACACCAACAAACATTTCAACAAATT 12236 Query 11564 ATGACCCCGAACACTGA-ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAA 11622 ||| || ||| | || | ||| |||||| | ||| || || ||||| |||| Sbjct 12235 CTGAACCAGAA-ATGGAGAAAAATGGAACGCCGGCTTCTCCAGCAATAGCCTTAGCTAGC 12177 Query 11623 AGTGTTTTACCTGTACCTGGT 11643 || || || || || |||||| Sbjct 12176 AGAGTCTTTCCAGTTCCTGGT 12156 >seq5306 Length=221055 Score = 95.1 bits (104), Expect = 2e-14 Identities = 178/257 (69%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 |||||| ||| |||||||| || || || ||| || |||||||| | ||| | Sbjct 19622 AATCTT-ACCTCCCAAGTGAGTGTCTCCGTTGGTTGCAAGAACTTCAAAAACACCGTTGT 19680 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 ||||| | || | ||||| || || |||||||| |||||||| | || | |||| Sbjct 19681 CAATGGTCAAGACACTGACATCGAATGTTCCACCACCAAGGTCAAAGACAAGGATGTTCT 19740 Query 7581 TATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640 | || | | | ||| || | || || || || || ||||| ||||||||||||| Sbjct 19741 TCTCACCACCCCT---CTTGTCTAACCCATAGGCAATGGCTGCCGCTGTTGGTTCATTAA 19797 Query 7641 TAATACGA-AGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 |||| | | |||| |||| |||||||| || | |||||||| || ||||| | || Sbjct 19798 TAATCCTAGCGACA-TTCAAACCAGCAATGATTCCTGCATCTTTGGTAGCTTGCCTCTGG 19856 Query 7700 GAATCGTTAAAGTAGGC 7716 | ||| || || || || Sbjct 19857 GCATCATTGAAATAAGC 19873 >seq99321 Length=426 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 105751 ACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTA 105810 || |||| |||||||||||| |||| ||||| |||||||| |||||||||| | | Sbjct 13 ACACGTAGCATTGGAATAATTCCATTTGATGTCCCATTTGTACCACGAATATAGCTTCCA 72 Query 105811 TTTGCACGTACATCGTGAACGTGTAAC-CCAATACCCCCAGCCCACTTACTGATACGCGC 105869 | ||||| | | |||||| | ||| ||||| || || || | || |||||| || Sbjct 73 GTGGCACGAATGTTGTGAAC-AGAAACACCAATGCCTCCTGCAGATTTGCTGATAACAGC 131 Query 105870 ACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTT 105914 ||| || |||| ||||| || || || || || ||||| || || Sbjct 132 ACATTCCTTTAAAGTATCATATATCCCTTCAATGCTATCCTCTTT 176 >seq3496 Length=88706 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCG 7676 ||| || || ||||||||||||||||| | | ||| | || |||||||| || | | Sbjct 46808 AGCAGCGGCAGTTGGTTCATTAATAATTCTCTGGACATCT-AGTCCAGCAATTCTTCCAG 46750 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 |||||||||| ||||||| ||| | ||| || ||||| || || || || || || || | Sbjct 46749 CATCTTTCGTAGCTTGTCTTTGAGCATCATTGAAGTAAGCTGGAACAGTGACTACAGCTT 46690 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 || ||| | || || || || | || || | || |||||||| || | ||| Sbjct 46689 TGGTAACTGTTTTTCCAAGGTAAGCCTCTGCAGTTTCCTTCATTTTTGTCAAAAC 46635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634201218965600