Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20hypochondriacus_20[genbank_20GCA_5F000753965.1_202014- 09-10] 117,340 sequences; 502,147,592 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7582 197 1e-44 seq6393 149 5e-30 seq815 147 2e-29 seq2839 145 6e-29 seq21423 140 3e-27 seq14104 131 1e-24 seq14666 125 6e-23 seq5800 120 2e-21 seq7103 118 9e-21 seq3496 118 9e-21 seq1911 109 4e-18 seq14764 107 2e-17 seq16595 104 2e-16 seq4947 104 2e-16 seq5726 98.7 8e-15 seq90508 91.5 1e-12 >seq7582 Length=33282 Score = 197 bits (218), Expect = 1e-44 Identities = 380/554 (69%), Gaps = 20/554 (4%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || || ||||||||||| || || |||||||| |||||||||| ||| | Sbjct 6674 AGCCATTGGAATCGATTTAGGAACAACCTACAGTTGTGTAGGTGTTTGGCGAAACGACCG 6615 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || || || ||| | ||||||||||| |||||||| || ||||| ||||| | || || Sbjct 6614 CGTCGAGATCATTCCAAATGATCAAGGAAACAGAACAACCCCATCGTATGTCGCGTTTAC 6555 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || |||| |||| | || || || |||||| |||||| | | |||||| || Sbjct 6554 CGACACCGAACGTTTAATCGGCGACGCCGCAAAAAATCAAGTCGCAATGAATCCTCAAAA 6495 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || |||| || ||||||||| | || || | | ||| || | || || | Sbjct 6494 CACCGTTTTCGACGCTAAACGTCTCATCGG-------TNTTCCGATCCGTCAGTACAATC 6442 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGG---AAAACCTTATATTGA 550287 || ||||| ||||| || | ||||| | | || ||||| ||| Sbjct 6441 CGACATGAAATTATGGCCGTTTAAGGTTGTTCCCGGTGAAGGCGATAAACCGATGATT-- 6384 Query 550288 AGCTACTC--ATGAAGGATCTGTTAAACAATTTT--CACCAGAACAAATTTCATCTATGG 550343 | | ||| || ||||| ||| ||| || | || ||| | ||||| || |||| Sbjct 6383 ATCGTCTCATATAAAGGA--GAACAAAAAATGTTCGCTCCGGAAGAGATTTCTTCAATGG 6326 Query 550344 TTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCA-AGAAGTTACGGATGCA 550402 |||||| |||||||| ||| || |||| | | || || || | ||| ||| Sbjct 6325 TTTTAACCAAAATGAAGGAAATCGCTGAAGCTTATTTAGGACAGAGTA-TTAACAATGGT 6267 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 || ||||||| || || ||||||||||| |||||| | |||||||| || ||||| ||| Sbjct 6266 GTTGTAACTGTTCCTGCTTATTTTAATGATTCACAAAGGCAAGCTACAAAGGATGCAGGA 6207 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 ||| |||| | |||||| | | ||||| ||||| |||||||||||||| |||| Sbjct 6206 TCGATTTCTGGGTTGAATGTTTTGAGGATTATTAATGAGCCTACTGCTGCTGCTATTGCT 6147 Query 550523 TATGGACTTGATAA 550536 ||||| | ||||| Sbjct 6146 TATGGTTTGGATAA 6133 >seq6393 Length=62329 Score = 149 bits (164), Expect = 5e-30 Identities = 180/241 (75%), Gaps = 7/241 (3%) Strand=Plus/Minus Query 550307 GTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACA 550366 |||| ||| || |||||||| | || ||||| |||||| ||||||| |||||| | | Sbjct 762 GTTACACA-TTCACACCAGAAGAGATATCATCAATGGTTCTAATGAAGATGAAAGATATT 704 Query 550367 GCCAGTGCTTTTGTTGGT--CAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATT 550424 ||| |||||| |||| ||||| | | | || || ||||||| ||||| || | Sbjct 703 GCCGAGGCTTTTTATGGTAGCAAGA--TCAAAAACGCTGTTGTAACTGTGCCAGCCTACT 646 Query 550425 TTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTC 550484 | ||| ||||| || | || ||||||||||| ||| |||||||| ||||||||| Sbjct 645 TCTCTGATTCACAGCGAAAGGCCACTAAAGATGCGGGAGCCATTGCTGGTCTTAATGTTG 586 Query 550485 TTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA--AACATAA 550542 ||||||| |||||||| || ||||||||||| | || || || ||||||| || |||| Sbjct 585 TTCGTATCATCAATGAGCCAACTGCTGCTGCCATGGCTTACGGTCTTGATACTAAGATAA 526 Query 550543 T 550543 | Sbjct 525 T 525 >seq815 Length=81296 Score = 147 bits (162), Expect = 2e-29 Identities = 147/188 (78%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG-TCAAGAAGTTACGGATGCAGTAATA 550408 |||| |||||| ||| ||| || | | |||| |||| || | | ||||||| ||| Sbjct 5402 TGAAGATGAAAGAAATAGCTGAGGCATATATTGGCTCAACC-GTGAAGAATGCAGTGATA 5460 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || |||||||| || || || |||||||| ||||| ||||||||||| ||| Sbjct 5461 ACTGTTCCTGCATATTTCAACGATTCTCAACGTCAGGCTACAAAAGATGCTGGTGTCATT 5520 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||||||||||||| | || |||||||||||||| |||||||| || | |||||||| Sbjct 5521 GCTGGACTTAATGTTATGCGCATTATCAATGAACCAACTGCTGCAGCTATCGCATATGGT 5580 Query 550529 CTTGATAA 550536 || || || Sbjct 5581 CTCGACAA 5588 Score = 127 bits (140), Expect = 2e-23 Identities = 142/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 |||||||| || ||||| ||||| ||||| |||||| || || ||| | ||| Sbjct 2328 GCTATAGGAATCGATTTGGGAACAACATACTCTTGTGTGGGAGTATGGGAGCATGACCGT 2387 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||| || | ||||||||||||||||||||||| || |||| || | ||||| Sbjct 2388 GTTGAAATCATAACAAATGATCAAGGTAACAGAACTACGCCTTCTTGGGTAGCATTCACT 2447 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 |||||| ||| | | ||||||| || || ||| |||| | || ||| ||| ||||| Sbjct 2448 GAAACTCAACGTCTCATTGGTGAAGCTGCCAAAAATCAGGTTGTTGCTAACCCTGCCAAT 2507 Query 550172 ACTATTTTTG 550181 ||||||| || Sbjct 2508 ACTATTTATG 2517 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/139 (74%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 361703 AGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCC 361762 |||||||| || | | ||||| |||||||| || || || |||||||| ||||| Sbjct 5582 AGACCATATGCGATAGCTGCAGCAGTTGGTTCATTGATAATGCGCATAACATTAAGTCCA 5523 Query 361763 GCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACA 361822 || || |||||| || || |||||||| | ||| || ||||||||||||||| Sbjct 5522 GCAATGACACCAGCATCTTTTGTAGCCTGACGTTGAGAATCGTTGAAATATGCAGGAACA 5463 Query 361823 GTAATCACTGC-TTTTTCA 361840 || |||||||| || |||| Sbjct 5462 GTTATCACTGCATTCTTCA 5444 >seq2839 Length=53906 Score = 145 bits (160), Expect = 6e-29 Identities = 160/208 (77%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTG-CTTTTGTTGGTCAAGA 550389 || || || ||||| | ||||| ||||| | ||||| || | | | |||| || || Sbjct 45070 ATATCTTCAATGGTCCTGATGAAGATGAAGGAGACAGC-AGAGACCTACCTTGG-CATGA 45013 Query 550390 A-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 | || | |||| ||| | ||||| ||||| ||||||||||| ||||| || ||||| | Sbjct 45012 ATGTGAAAAATGCTGTAGTCACTGTGCCAGCCTATTTTAATGATTCACAGCGGCAAGCAA 44953 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 ||||||||||||| ||||| ||||||||||| | || |||||||||||||| |||| Sbjct 44952 CTAAAGATGCTGGTACCATTGCAGGACTTAATGTCATGCGCATTATCAATGAACCAACTG 44893 Query 550509 CTGCTGCACTTGCATATGGACTTGATAA 550536 | |||||| |||| ||||| |||| ||| Sbjct 44892 CGGCTGCAATTGCCTATGGGCTTGGTAA 44865 Score = 91.5 bits (100), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || || ||| | ||||| || || ||||| ||||||||||| ||| Sbjct 51467 AGCAATTGGAATCGATCTCGGAACAACCTACTCATGTGTGGGTGTTTGGCAGCATGACCG 51408 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| || ||||||||| || ||| |||||||||| |||| |||| ||||| Sbjct 51407 TGTAGAAATCATCATCAATGATCAGGGCAACCGAACTACTCCTTCTTGTGTTGCTTTCGA 51348 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC-A 550169 | | | | | | | |||||||| || || ||| | || || ||| ||||||| | | Sbjct 51347 CCATAATCATCGTCTTGTTGGTGAAGCTGCTAAAAACCAGGCTACTACTAATCCTGCNTA 51288 Query 550170 ATACTATTTTTG 550181 | ||||| |||| Sbjct 51287 ACACTATCTTTG 51276 >seq21423 Length=2428 Score = 140 bits (154), Expect = 3e-27 Identities = 315/468 (67%), Gaps = 14/468 (3%) Strand=Plus/Minus Query 552123 GTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATT 552180 ||||||||||||||||||||||| ||||| ||| ||| | || | ||| | || || Sbjct 1756 GTGCTTGTTGGTGGATCTACAAGGATTCCCAAAGTTCAACAGTTGCTGCAAGAT-TTCTT 1698 Query 552181 TCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCG 552240 | ||||| || | | | ||| | || || |||||||| || || |||||||| | Sbjct 1697 T-AATGGAAAGGAGCTTTGCAAGAGTATCAACCCCGATGAGGCAGTAGCTTATGGTGCAG 1639 Query 552241 CAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTG 552300 | | || || || ||| | | |||| || |||| ||| | ||| | | | || Sbjct 1638 CTGTGCAGGCTGCCATTTTGTGTGGAGAAGGGAATGAGAAAGTGCAAGACTTGCTTCTGT 1579 Query 552301 TAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTA 552360 | ||||| ||||| |||||||||| || || || | ||| ||| |||||||| ||| | Sbjct 1578 TGGATGTCACTCCATTATCTCTTGGATTGGAGACTGCTGGTGGTGTTATGACTGTTCTCA 1519 Query 552361 TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA 552420 || || || || || |||||| || ||| | || || || || || || |||| Sbjct 1518 TCCCAAGGAACACCACCATTCCTACAAAGAAAGAGCAGGTGTTCTCAACATACTCGGATA 1459 Query 552421 ATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATA 552480 | ||| | | ||| ||||| ||| |||||||||||||| | ||| || || Sbjct 1458 ACCAACCGGGTGTGTTGATTCAGGTTTATGAAGGAGAAAGAACAAGGACTCGGGACAA-- 1401 Query 552481 ATCAACTTGGT-----ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACC 552535 ||||||| | | || | ||| ||| ||||||||||| || | || || || Sbjct 1400 --CAACTTGTTAGGCAAGTTCGAGCTTA-CAGGCATTCCTCCTGCACCAAGGGGTGTCCC 1344 Query 552536 GCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 || || | || ||||| || ||||| ||||| ||| | ||||| Sbjct 1343 TCAGATCAATGTCTGCTTCGACATTGATGCAAATGGTATTCTCAATGT 1296 >seq14104 Length=24566 Score = 131 bits (144), Expect = 1e-24 Identities = 348/524 (66%), Gaps = 16/524 (3%) Strand=Plus/Minus Query 552076 AAGT-TTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 |||| ||| || ||| | ||||| || || || || ||||| | || ||||||||| Sbjct 1896 AAGTGTTTGAGGGATGCCAAGATGGACAAGAGCACTGTCCATGATGTCGTCCTTGTTGGT 1837 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTA--AGTTCTTATTTCAATGGTAAAA 552192 ||||| || |||||||| || | | | ||||| || | || ||| |||||||| Sbjct 1836 GGATCCACTAGAATTCCCAAGGTACAACAGTTGTTACAAGAT-TTCTTT-AATGGTAAGG 1779 Query 552193 AATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAG 552252 || | ||||| | || || |||||||||||||| |||||||| || | ||||| | Sbjct 1778 AACTTTGCAAAAGTATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTCCAAGCTG 1719 Query 552253 CTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTC 552312 |||| | ||| || | || || | ||| | | | ||| | ||||| |||| Sbjct 1718 CTATCTTGAGTGGTGAAGGAAACGAGAAGGTGCAAGACCTCTTGCTTCTTGATGTCACTC 1659 Query 552313 CTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATA 552372 |||| || || ||| | || || | ||| ||| | |||||| |||||| || || | Sbjct 1658 CTCTCTCCCTCGGTCTTGAGACTGCTGGTGGTGTCATGACTGTCCTTATCCCAAGGAACA 1599 Query 552373 CTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTG 552432 | ||||| || || || | || || || || || || || || ||| ||| || Sbjct 1598 CCACTATCCCAACCAAGAAGGAGCAAGTTTTCTCAACTTACTCTGACAACCAACCTGGTG 1539 Query 552433 TTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT---- 552488 | || ||| | | |||||||||||||| || | || || |||||| Sbjct 1538 TATTGATCCAAGTATATGAAGGAGAAAGAACCAGGACCAGGGACAA----CAACTTGTTG 1483 Query 552489 GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT- 552547 |||| ||| | | || ||||| || || ||| | || || || || ||| || Sbjct 1482 GGTAAATTTGAGCTTTCTGGCATTCCCCCAGCCCCTAGAGGTGTCCCTCAGATTACTGTN 1423 Query 552548 -TACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 | |||| || || ||||||||||| || |||||||| ||||| Sbjct 1422 GTGCTTT-GACATTGATGCCAATGGTATCTTGAATGTCTCTGCT 1380 Score = 116 bits (128), Expect = 3e-20 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | ||||| || || || || |||||||| |||||||||||||||||||||| Sbjct 22180 ATGCTGTCGTTACTGTTCCTGCCTACTTCAATGACTCTCAACGTCAAGCTACTAAAGATG 22239 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| || |||| | ||||| | ||||| || || || || ||||||||||| Sbjct 22240 CTGGAGTAATCTCTGGTTTGAATGTGATGCGTATCATTAACGAGCCAACTGCTGCTGCTA 22299 Query 550518 TTGCATATGGACTTGATAA 550536 |||| ||||| |||||||| Sbjct 22300 TTGCTTATGGTCTTGATAA 22318 Score = 116 bits (128), Expect = 3e-20 Identities = 307/466 (66%), Gaps = 12/466 (3%) Strand=Plus/Plus Query 552131 TGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGT 552188 ||||||||| || |||||||| || ||| | |||| ||| | | ||||| ||| Sbjct 22783 TGGTGGATCCACTAGAATTCCCAAGGTTCAGCAGTTGTTGCAAGATTTC--TTCAACGGT 22840 Query 552189 AAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAA 552248 || | | ||||| | || || |||||||||||||| |||||||| || | ||| Sbjct 22841 AAGGAGCTTTGCAAAAGTATCAACCCGGATGAGGCTGTTGCATATGGTGCTGCTGTCCAA 22900 Query 552249 GCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTT 552308 || ||||| | ||| || | || || | ||| | | | ||| | ||||| Sbjct 22901 GCCGCTATCTTGAGTGGTGAAGGAAACGAGAAGGTCCAAGACCTCTTGCTTCTCGATGTC 22960 Query 552309 ACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGA 552368 |||||||| ||||| ||| | || || | ||| ||| |||||||| |||||| || Sbjct 22961 ACTCCTCTCTCTCTCGGTCTTGAGACTGCTGGTGGTGTTATGACTGTCCTTATCCCAAGG 23020 Query 552369 AATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACT 552428 || || || || || || || | || || || || || || || || || | Sbjct 23021 AACACCACAATCCCCACAAAGAAGGAGCAGGTGTTCTCAACTTACTCTGACAACCAGCCG 23080 Query 552429 GCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT 552488 | ||| |||||| | | |||||||||||||| || || || || |||||| Sbjct 23081 GGTGTGTTGATTCAAGTCTATGAAGGAGAAAGAACCAGGACCAAGGACAA----CAACTT 23136 Query 552489 ----GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGA 552544 |||| ||| | | || ||||| || |||||| | || || || || || | Sbjct 23137 GTTGGGTAAATTTGAGCTCTCTGGCATTCCCCCAGCTCCTAGGGGTGTTCCTCAGATCAA 23196 Query 552545 AGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 ||| ||||| || ||||||||||| || ||||| || ||||| Sbjct 23197 TGTTTGCTTCGACATTGATGCCAATGGTATCTTGAACGTCTCTGCT 23242 Score = 89.7 bits (98), Expect = 4e-12 Identities = 105/141 (74%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760 ||||||||||||| | | |||||| ||||| |||||||| || || ||||| | | Sbjct 22314 CAAGACCATAAGCAATAGCAGCAGCAGTTGGCTCGTTAATGATACGCATCACATTCAAAC 22255 Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820 | | ||| | |||||| ||| ||||||||||| | ||||| || || ||||||| Sbjct 22254 CAGAGATTACTCCAGCATCTTTAGTAGCTTGACGTTGAGAGTCATTGAAGTAGGCAGGAA 22195 Query 361821 CAGTAATCACTGC-TTTTTCA 361840 |||||| || || ||||||| Sbjct 22194 CAGTAACGACAGCATTTTTCA 22174 >seq14666 Length=16394 Score = 125 bits (138), Expect = 6e-23 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||| | || || ||||| ||||| || || |||||| ||| || | Sbjct 16239 GCGATTGGAATTGATCTTGGGACGACATACTCATGTGTAGGAGTATGGCAACATGATAGA 16298 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||||||||| ||||||||||| || ||||| ||||| ||||| ||| |||| ||| Sbjct 16299 GTTGAAATTATTGCGAATGATCAAGGGAATAGAACGACTCCCTCTTACGTTGCTTTTACG 16358 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAA 550143 || ||||||| || |||||||||| || || Sbjct 16359 GATACTGAACGATTGATTGGTGATGCTGCTAA 16390 >seq5800 Length=18681 Score = 120 bits (132), Expect = 2e-21 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||||||||| ||| || || ||| ||||| ||||| || || ||| Sbjct 3547 AGACGAAGGACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGTGTCCTT 3488 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||||||||| |||||||| |||||||| |||||||| || ||||| || || Sbjct 3487 CCATCTTCAAGTTGTTTCCCGGCAAAGATAAGTCTCTGCTGATCTGGCGGAATACCCTCC 3428 Query 563377 TTATCTTGAATTTT 563390 ||||| ||||| || Sbjct 3427 TTATCCTGAATCTT 3414 >seq7103 Length=48943 Score = 118 bits (130), Expect = 9e-21 Identities = 155/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||||||| | ||||| |||||| |||||||| || | || |||| | || Sbjct 15133 ATTGGTATAGATCTGGGAACGACATATTCATGTGTTGGAGTATATAAAGATGGGCATGTG 15074 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 |||||||| |||||||||||||||||||| | || || || | || ||||||| || Sbjct 15073 GAAATTATAGCCAATGATCAAGGTAACAGGATCACACCTTCATGGGTAGCTTTCACTGAT 15014 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCT-ACCAATAC 550173 |||||| || |||| || || || || ||||||| || |||||| | | | || Sbjct 15013 ACTGAAAGGTTGATTGGAGAAGCTGCCAAGAATCAAGCATCTTTAAATCCTGAACGA-AC 14955 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAA 550205 |||||||| | |||||| | ||||| |||| Sbjct 14954 AATTTTTGACGTTAAACGACTTATTGGTAGAA 14923 Score = 87.8 bits (96), Expect = 1e-11 Identities = 194/289 (67%), Gaps = 14/289 (5%) Strand=Plus/Plus Query 361528 ATGATTCATGATTAAATAATCTATATCTTCACCACCTAAATGTGTACTACCGCTAACTGC 361587 || || ||||| | || ||| | ||||||||||||||||| ||| || || || Sbjct 12617 ATAATCCATGACTCTATGATCAAAGTCTTCACCACCTAAATGGGTATCTCCACTTG-TGG 12675 Query 361588 TAATGTTCT-AAATAAGCCATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCAC 361646 || || ||||| ||||||| ||| | | || || |||||| | || || ||| Sbjct 12676 AAAGAACCTCAAATACACCATTATCAATTGTTAGGATACTAACATCAAAAGTACCACCAC 12735 Query 361647 CTAAATCATATATGATAATATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGAC 361706 | | |||||| | | ||| ||| || | |||| |||| || || || Sbjct 12736 CAAGATCATACACCAAAATGTTC-----------ATCTCTCCACCTTTTTTGTCTAA-AC 12783 Query 361707 CATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTA 361766 ||||||| | || ||||||||||| ||||| ||||| || ||||| | || || | Sbjct 12784 CATAAGCAATTGCTGCAGCTGTTGGCTCGTTGATTATCCGAACCACATTCAACCCGGCAA 12843 Query 361767 TTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGC 361815 || || ||||| |||||||| | |||||||||||| || || || Sbjct 12844 TTGTTCCGGCATCCTTTGTGGCTTGCCTTTGTGCATCATTGAAGTAAGC 12892 >seq3496 Length=88706 Score = 118 bits (130), Expect = 9e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCA 550402 ||||| | |||||||| |||| || |||| |||| || |||||| | || Sbjct 46635 GTTTTGACAAAAATGAAGGAAACTGCAGAGGCTTACCTTGGAAAAACAGTTACCAAAGCT 46694 Query 550403 GTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGA 550462 ||| | ||||| ||||| || || ||||| | ||| | |||||||| |||||||||||| Sbjct 46695 GTAGTCACTGTTCCAGCTTACTTCAATGATGCTCAAAGACAAGCTACGAAAGATGCTGGA 46754 Query 550463 CGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCA 550522 | ||||||||||| |||| | | ||||| |||||||| ||||| ||||| ||| | Sbjct 46755 AGAATTGCTGGACTAGATGTCCAGAGAATTATTAATGAACCAACTGCCGCTGCTCTTTCC 46814 Query 550523 TATGG 550527 ||||| Sbjct 46815 TATGG 46819 >seq1911 Length=305716 Score = 109 bits (120), Expect = 4e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || |||||||| ||||| ||||| |||||||||||| | || ||||| |||||| Sbjct 255625 GCTGTGATAACTGTGCCAGCTTATTTCAATGACTCACAAAGAACTGCAACTAAGGATGCT 255684 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || |||||||| | |||||||||| || ||||||||||| || |||||| || | Sbjct 255685 GGTAAAATTGCTGGTTTGGATGTTCTTCGGATCATCAATGAACCCACAGCTGCTTCATTA 255744 Query 550520 GCATATGG 550527 |||||||| Sbjct 255745 GCATATGG 255752 Score = 93.3 bits (102), Expect = 3e-13 Identities = 196/290 (68%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 552301 TAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTA 552360 |||| || || || |||| || |||||||| || | || || | ||||| || | | Sbjct 258174 TAGACGTGACACCATTATCCCTAGGTTTAGAGACTCTCGGTGGGGTAATGACGAAGATCA 258233 Query 552361 TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA 552420 || |||||||| || | ||| ||||| || || ||||| | ||||| Sbjct 258234 TCCCGAGAAATACAACATTGCCTACATCCAAATCAGAGGTTTTCTCTACAGCTGCAGATG 258293 Query 552421 ATCAAACTGCTGTTACAATTCAAATTT-TTGAAGGAGAAAGAAAATTCACTAAAGATAAT 552479 || || ||| | | |||| || || |||| |||||| | || | |||||| Sbjct 258294 GACAGACAAGTGT-AGAGATCAATGTTCTTCAAGGTGAAAGAGAGTTTGTGAGGGATAAT 258352 Query 552480 AATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAA 552539 || |||||| | || ||||| || ||||||||||| ||||| |||||||| || Sbjct 258353 AAATCACTTGGAAGCTTCCGGTTAGACGGGATTCCTCCTGCCCCTCGAGGAGTACCCCAG 258412 Query 552540 ATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 ||||||||| ||||| || |||||||| || ||| | ||| ||||| Sbjct 258413 ATTGAAGTTCGGTTCGACATTGATGCCAACGGTATTCTCTCTGTCACTGC 258462 >seq14764 Length=84029 Score = 107 bits (118), Expect = 2e-17 Identities = 137/186 (74%), Gaps = 6/186 (3%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||||||||| ||||| | ||||||||| |||||||| ||||| || | || Sbjct 1995 ATGTTGTAATCAGCAAGAGTACGGCCATCTTCAAGCTGTTTTCCTGCAAAGATCAACCTC 2054 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 |||||||| || |||||||| || || || ||||| ||| ||| || ||||| || Sbjct 2055 TGCTGATCTGGGGGAATTCCCTCCTTGTCCTGAATCTTTGTTTTAACATTATCAATGGTG 2114 Query 563413 TC---AGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATT 563469 || | | | | || | | || |||| ||| || ||||| ||||| || ||||| ||| Sbjct 2115 TCTGAACTCTCA--ACCTCCAAG-GTAATAGTCTTTCCAGTGAGAGTCTTGACGAAGATT 2171 Query 563470 TGCATA 563475 |||||| Sbjct 2172 TGCATA 2177 Score = 107 bits (118), Expect = 2e-17 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||| ||||| || || || ||| | |||| ||| ||||| || || ||||| | Sbjct 2765 ACGGAGAACAAGGTGGAGAGTTGACTCTTTTTG--AATGTTGTAGTCGGCAAGAGTACGG 2822 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| ||||| || || || | | ||||||||| || |||||||||||| Sbjct 2823 CCATCTTCTAGTTGCTTTCCTGCGAAGATCAAACGTTGCTGATCTGGTGGAATTCCTTCT 2882 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 || ||||| || || ||| || || || || || | | || ||||||||| Sbjct 2883 TTGTCTTGGATCTTGGTTTTGACGTTGTCTATGGTGTCTGAACTCTCGAC-TTCGAGAGT 2941 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || ||||| ||||| ||||| ||||| |||||||| Sbjct 2942 GATTGTCTTACCGGTAAGGGTTTTCACGAAGATTTGCAT 2980 Score = 87.8 bits (96), Expect = 1e-11 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| || ||||| |||||||| ||| | ||| |||||||||||||| | ||| | Sbjct 1731 AGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGG--ATATTGTAATCAGCCAAAGTAC 1788 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||| || || || || |||||||| | || ||||| ||||| || || |||| Sbjct 1789 GACCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGGGGGATCCCTT 1848 Query 563375 CTTTATCTTGAATTTT 563390 | || ||||| ||||| Sbjct 1849 CCTTGTCTTGGATTTT 1864 >seq16595 Length=7721 Score = 104 bits (114), Expect = 2e-16 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 ||||||||||||||||| || || || | | ||||||||| || ||||||||||| || Sbjct 607 TCTTCAAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATTCCTTCCTTG 548 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAAC 563438 ||||| || || ||| || ||||| || |||| | || |||||||||| Sbjct 547 TCTTGGATCTTGGTTTTGACGTTGTCAATGGTGTCAGAACTCTCGAC-CTCGAGAGTAAT 489 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| |||||||| ||||| ||||| |||||||| Sbjct 488 GGTTTTGCCAGTAAGGGTTTTCACGAAGATTTGCAT 453 >seq4947 Length=56615 Score = 104 bits (114), Expect = 2e-16 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 550311 AACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCA 550370 |||||| ||| || |||||| | | | ||||| | |||||||| | || || Sbjct 32860 AACAATATTCTCCTAGTCAAATTGGAGCCTTTGTTTTGACCAAAATGAAGGAGACTGCAG 32801 Query 550371 GTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 |||| |||| || |||||| | || || |||| || ||||| || || |||| Sbjct 32800 AGGCTTACCTTGGAAAAACAGTTACCAAGGCCGTTGTAACCGTTCCAGCTTACTTCAATG 32741 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 | | || | ||||| || ||||||||||| | ||||| ||||| |||||| | | Sbjct 32740 ATGCTCAGAGACAAGCAACAAAAGATGCTGGGAGAATTGCAGGACTGGATGTTCAGAGAA 32681 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||| |||||||| ||||||||||| ||| | ||||| Sbjct 32680 TTATTAATGAACCCACTGCTGCTGCTCTTTCTTATGG 32644 >seq5726 Length=29179 Score = 98.7 bits (108), Expect = 8e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319 || || || | |||||| || ||| || || ||||||||||| ||||| | | Sbjct 26697 CGAAGCACCAAATGAAGAGTCGATTCCTTCTGGATGTTGTAATCAGCGAGAGTACGGCCA 26756 Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 |||||||||||||||||||| ||||| || | ||| || || || ||||||||||| || Sbjct 26757 TCTTCAAGTTGTTTTCCGGCGAAAATGAGACGTTGTTGGTCTGGTGGAATTCCTTCCTTG 26816 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGTAAC 563438 ||||| || || || || || || || |||| | || | | || || || | Sbjct 26817 TCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCAGAG-GATTCAACCTCTAGGGTTAT 26875 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| || || || ||||| ||||| || ||||| Sbjct 26876 GGTTTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 26911 >seq90508 Length=363 Score = 91.5 bits (100), Expect = 1e-12 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 |||| || | ||||| | || ||||| || || ||||||||||| ||| | ||| | Sbjct 207 AAGTAACAAAGGCAGTGGTTACAGTACCTGCTTACTTTAATGACTCTCAAAGGACAGCAA 148 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 | || ||||| || ||||||||||| || | || ||| | ||||| ||||| || |||| Sbjct 147 CAAAGGATGCAGGCCGTATTGCTGGGCTGGAAGTACTTAGAATTATTAATGAGCCGACTG 88 Query 550509 CTGCTGCACTTGCATATGGACTTGATAA 550536 ||||| | | || ||||| |||| || Sbjct 87 CTGCTTCTTTGGCTTATGGTTTTGAGAA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4023090531596600