Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20hypochondriacus_20[genbank_20GCA_5F000753965.1_202014- 09-10] 117,340 sequences; 502,147,592 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq7582 226 2e-53 seq14104 161 6e-34 seq2839 143 2e-28 seq815 131 1e-24 seq5726 123 2e-22 seq14666 122 6e-22 seq3496 122 6e-22 seq14764 120 2e-21 seq4947 116 2e-20 seq5800 107 1e-17 seq6393 104 2e-16 seq16595 102 5e-16 seq1525 93.3 3e-13 seq5306 87.8 1e-11 >seq7582 Length=33282 Score = 226 bits (250), Expect = 2e-53 Identities = 392/559 (70%), Gaps = 26/559 (5%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| || ||||||||||| || ||||||||||||| |||||||| ||| | Sbjct 6673 GCCATTGGAATCGATTTAGGAACAACCTACAGTTGTGTAGGTGTTTGGCGAAACGACCGC 6614 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || ||| | ||||| ||||| || |||||||| ||||| ||||| | ||||| Sbjct 6613 GTCGAGATCATTCCAAATGATCAAGGAAACAGAACAACCCCATCGTATGTCGCGTTTACC 6554 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| | | || || || || || ||| |||||| ||| |||||| || Sbjct 6553 GACACCGAACGTTTAATCGGCGACGCCGCAAAAAATCAAGTCGCAATGAATCCTCAAAAC 6494 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||| || |||||| | | || ||| | ||| | | || ||||| Sbjct 6493 ACCGTTTTCGACGCTAAACGTCTCATCGGTNTTCC-------GATCCGTCAGTACAATCC 6441 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGG---TAAACC-ATA--TATA 474622 || ||| ||||| |||||||| | | || || |||||| || ||| Sbjct 6440 GACATGAAATTATGGCCGTTTAAGGTTGTTCCCGGTGAAGGCGATAAACCGATGATTATC 6381 Query 474623 GAAGCAATACACGCAGGTGAAACTAAACAATTTTCAC--CGGAACAAATTTCTTCAATGG 474680 | || || | ||| ||| ||| ||| ||| | ||||| | ||||||||||||| Sbjct 6380 GTCTCA-TATAA--AGGAGAAC--AAAAAATGTTCGCTCCGGAAGAGATTTCTTCAATGG 6326 Query 474681 TTTTAGCCAAAATGAAACAAACCGCG--AGCTCATATCTTGGACA-AGAAGTAACTGATG 474737 ||||| |||||||||| ||| ||| |||| ||| | ||||| || | |||| ||| Sbjct 6325 TTTTAACCAAAATGAAGGAAATCGCTGAAGCT--TATTTAGGACAGAGTATTAACA-ATG 6269 Query 474738 CAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGG 474797 || | |||||||| || |||||||||||||| ||| | ||||| || || ||||| | Sbjct 6268 GTGTTGTAACTGTTCCTGCTTATTTTAATGATTCACAAAGGCAAGCTACAAAGGATGCAG 6209 Query 474798 GAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTG 474857 || ||| | || | |||||||| | ||||||||||| || || || || || ||| Sbjct 6208 GATCGATTTCTGGGTTGAATGTTTTGAGGATTATTAATGAGCCTACTGCTGCTGCTATTG 6149 Query 474858 CTTATGGTCTTGATAAGAA 474876 |||||||| | |||||||| Sbjct 6148 CTTATGGTTTGGATAAGAA 6130 >seq14104 Length=24566 Score = 161 bits (178), Expect = 6e-34 Identities = 331/485 (68%), Gaps = 9/485 (2%) Strand=Plus/Minus Query 475694 GTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTT 475753 |||||||| | || ||||| || || || || |||||||| || || | | || || Sbjct 1860 GTCCATGATGTCGTCCTTGTTGGTGGATCCACTAGAATTCCCAAGGTACAACAGTTG-TT 1802 Query 475754 TCATCATAT-TTTAATGGTAA--AAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTT 475810 || || | ||||||||||| || || | ||||| | || |||||||| |||||| Sbjct 1801 ACAAGATTTCTTTAATGGTAAGGAACTTTGCA--AAAGTATCAACCCTGATGAGGCTGTT 1744 Query 475811 GCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAAT 475870 || ||||| |||||||||||||| ||||| || ||| || | ||||||| | | Sbjct 1743 GCTTATGGTGCTGCTGTCCAAGCTGCTATCTTGAGTGGTGAAGGAAACGAGAAGGTGCAA 1684 Query 475871 AATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATT 475930 | | | ||| |||| || ||||| || || | |||||||| || | ||| || | Sbjct 1683 GACCTCTTGCTTCTTGATGTCACTCCTCTCTCCCTCGGTCTTGAGACTGCTGGTGGTGTC 1624 Query 475931 ATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCC 475990 |||||| ||||| || || || |||||||| ||| || |||| || || Sbjct 1623 ATGACTGTCCTTATCCCAAGGAACACCACTATCCCAACCAAGAAGGAGCAAGTTTTCTCA 1564 Query 475991 ACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTC 476050 ||||| ||||| || ||| | |||| |||||| | | |||||| ||||||| Sbjct 1563 ACTTACTCTGACAACCAACCTGGTGTATTGATCCAAGTATATGAAGGAGAAAGAACCAGG 1504 Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || | || || ||| | || | ||| | ||| || ||||| || || || ||| Sbjct 1503 ACCAGGGACAACAACTTGTTGGGTAAATTTGAGCTTTCTGGCATTCCCCCAGCCCCTAGA 1444 Query 476111 GGAGTTCCTCAAATTGAAGT--TACTTTTGATATTGATGCAAATGGTATTCTTAATGTTA 476168 || || ||||| ||| || | | ||||| |||||||| |||||||| | ||||| Sbjct 1443 GGTGTCCCTCAGATTACTGTNGTGC-TTTGACATTGATGCCAATGGTATCTTGAATGTCT 1385 Query 476169 CTGCT 476173 ||||| Sbjct 1384 CTGCT 1380 Score = 131 bits (144), Expect = 1e-24 Identities = 114/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||||||||| || || || ||||| |||||||||||||| |||||||||| Sbjct 22180 ATGCTGTCGTTACTGTTCCTGCCTACTTCAATGACTCTCAACGTCAAGCTACTAAAGATG 22239 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| ||| | ||| | ||||| | ||||| ||||| || ||||| || || || Sbjct 22240 CTGGAGTAATCTCTGGTTTGAATGTGATGCGTATCATTAACGAGCCAACTGCTGCTGCTA 22299 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||||||||||||||| Sbjct 22300 TTGCTTATGGTCTTGATAAGAA 22321 Score = 123 bits (136), Expect = 2e-22 Identities = 263/390 (67%), Gaps = 2/390 (1%) Strand=Plus/Plus Query 475785 AAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||||| | || || ||||| |||||||||||||| |||||||||||||| ||||| || Sbjct 22854 AAAGTATCAACCCGGATGAGGCTGTTGCATATGGTGCTGCTGTCCAAGCCGCTATCTTGA 22913 Query 475845 CAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCAT 475904 ||| || | ||||||| | | | | | ||| | || || ||||| || || Sbjct 22914 GTGGTGAAGGAAACGAGAAGGTCCAAGACCTCTTGCTTCTCGATGTCACTCCTCTCTCTC 22973 Query 475905 TAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCC 475964 | |||||||| || | ||| || |||||||| ||||| || || || | |||| Sbjct 22974 TCGGTCTTGAGACTGCTGGTGGTGTTATGACTGTCCTTATCCCAAGGAACACCACAATCC 23033 Query 475965 CATGCAAAAAATCA-AAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 | |||| || | | || || || ||||| ||||| || || | ||| || Sbjct 23034 C-CACAAAGAAGGAGCAGGTGTTCTCAACTTACTCTGACAACCAGCCGGGTGTGTTGATT 23092 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 ||| ||| |||||| ||||||| || || || || ||| | || | ||| | Sbjct 23093 CAAGTCTATGAAGGAGAAAGAACCAGGACCAAGGACAACAACTTGTTGGGTAAATTTGAG 23152 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 || || ||||| || ||||| || || |||||||| || | ||| || || ||| Sbjct 23153 CTCTCTGGCATTCCCCCAGCTCCTAGGGGTGTTCCTCAGATCAATGTTTGCTTCGACATT 23212 Query 476144 GATGCAAATGGTATTCTTAATGTTACTGCT 476173 ||||| |||||||| | || || ||||| Sbjct 23213 GATGCCAATGGTATCTTGAACGTCTCTGCT 23242 Score = 105 bits (116), Expect = 4e-17 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| || || ||||||||||| ||||| || || || ||||| ||| || Sbjct 3211 ACTGTTCCAGCCTACTTCAATGATTCTCAGCGTCAGGCTACCAAGGATGCTGGAGTCATC 3152 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 | || | |||||| | |||||||||||||| || || || || || | ||||||||| Sbjct 3151 TCTGGCTTGAATGTTATGCGTATTATTAATGAGCCCACCGCTGCTGCTATCGCTTATGGT 3092 Query 474866 CTTGATAAGAA 474876 ||||| ||||| Sbjct 3091 CTTGACAAGAA 3081 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||| ||||| |||||| | || || |||||| ||||| | || |||||| ||| Sbjct 20702 TGCTATTGGAATTGATCTCGGTACCACTTACTCATGTGTTGGAGTATGGCAACATGACCG 20761 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||| ||||| ||||| || ||||| || || || || || || ||| || || Sbjct 20762 TGTTGAAATCATTGCTAATGATCAGGGTAACAGGACTACCCCTTCGTACGTTGGATTCAC 20821 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAA 474480 ||| | ||||| | ||||| ||||||||||| Sbjct 20822 TGATAGTGAACGATTGATTGGTGATGCTGCTAA 20854 >seq2839 Length=53906 Score = 143 bits (158), Expect = 2e-28 Identities = 161/210 (77%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 474668 ATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA 474726 || ||||||||||| | || ||||| | || || ||| | || ||||| || || Sbjct 45070 ATATCTTCAATGGTCCTGATGAAGATGAAGGAGACAGCAGAGACC-TACCTTGG-CATGA 45013 Query 474727 A-GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785 | || | |||| ||| | ||||| ||||| |||||||||||||| || || ||||||| Sbjct 45012 ATGTGAAAAATGCTGTAGTCACTGTGCCAGCCTATTTTAATGATTCACAGCGGCAAGCAA 44953 Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAG 474845 |||||||||| || | |||||||| |||||||| | || ||||| ||||||||||| | Sbjct 44952 CTAAAGATGCTGGTACCATTGCAGGACTTAATGTCATGCGCATTATCAATGAACCAACTG 44893 Query 474846 CAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | || ||| |||| ||||| |||| ||||| Sbjct 44892 CGGCTGCAATTGCCTATGGGCTTGGTAAGA 44863 Score = 89.7 bits (98), Expect = 3e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 290822 CCAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGA 290881 ||||| ||||| | | || ||| || ||||||||||| ||||| | | |||| ||| Sbjct 44868 CCAAGCCCATAGGCAATTGCAGCCGCAGTTGGTTCATTGATAATGCGCATGACATTAAGT 44927 Query 290882 CCTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGG 290941 |||||||| | | | |||| |||||| || || || | |||||||||||| || || Sbjct 44928 CCTGCAATGGTACCAGCATCTTTAGTTGCTTGCCGCTGTGAATCATTAAAATAGGCTGGC 44987 Query 290942 ACTGTAATAACAGCTTTTTCCACTTTC 290968 || || | ||||| |||| ||| ||| Sbjct 44988 ACAGTGACTACAGCATTTTTCACATTC 45014 >seq815 Length=81296 Score = 131 bits (144), Expect = 1e-24 Identities = 114/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 ||||||| || |||||||| |||||||| || |||||||||||||| || || ||||||| Sbjct 5450 ATGCAGTGATAACTGTTCCTGCATATTTCAACGATTCTCAACGTCAGGCTACAAAAGATG 5509 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| || ||||||||| | || ||||| ||||||||||| || || || Sbjct 5510 CTGGTGTCATTGCTGGACTTAATGTTATGCGCATTATCAATGAACCAACTGCTGCAGCTA 5569 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 | || |||||||| || ||||| Sbjct 5570 TCGCATATGGTCTCGACAAGAA 5591 >seq5726 Length=29179 Score = 123 bits (136), Expect = 2e-22 Identities = 133/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || |||||||| ||||| | | |||||||||||| ||||| || ||||| ||||||||| Sbjct 26733 TTGTAATCAGCGAGAGTACGGCCATCTTCAAGTTGTTTTCCGGCGAAAATGAGACGTTGT 26792 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 || || || |||||||||||||||||||| ||||| |||||| || || || ||| Sbjct 26793 TGGTCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCA 26852 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || ||||| || ||||| || || || || || ||||| || || Sbjct 26853 GAGGATTCAACCTCTAGGGTTATGGTTTTCCCTGTTAGGGTTTTCACGAAGATCTG 26908 >seq14666 Length=16394 Score = 122 bits (134), Expect = 6e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| |||||| | || || || ||| ||||||| || |||||| ||| || | Sbjct 16239 GCGATTGGAATTGATCTTGGGACGACATACTCATGTGTAGGAGTATGGCAACATGATAGA 16298 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| ||||| ||||| ||||| |||||||| || || || || ||| ||||||| Sbjct 16299 GTTGAAATTATTGCGAATGATCAAGGGAATAGAACGACTCCCTCTTACGTTGCTTTTACG 16358 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAA 474480 || ||||||| | ||||| ||||||||||| Sbjct 16359 GATACTGAACGATTGATTGGTGATGCTGCTAA 16390 >seq3496 Length=88706 Score = 122 bits (134), Expect = 6e-22 Identities = 140/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 474680 GTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGC 474738 ||||| | |||||||| |||| || ||| | || |||||| || ||| || | || Sbjct 46635 GTTTTGACAAAAATGAAGGAAACTGCAGAGG-CTTACCTTGGAAAAACAGTTACCAAAGC 46693 Query 474739 AGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGG 474798 ||| | ||||||||||| || || |||||| ||||| | ||||| || |||||||| || Sbjct 46694 TGTAGTCACTGTTCCAGCTTACTTCAATGATGCTCAAAGACAAGCTACGAAAGATGCTGG 46753 Query 474799 AAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGC 474858 ||||||||| || || |||| | ||||||||||||||||| || || || ||| | Sbjct 46754 AAGAATTGCTGGACTAGATGTCCAGAGAATTATTAATGAACCAACTGCCGCTGCTCTTTC 46813 Query 474859 TTATGG 474864 ||||| Sbjct 46814 CTATGG 46819 Score = 89.7 bits (98), Expect = 3e-12 Identities = 95/125 (76%), Gaps = 3/125 (2%) Strand=Plus/Plus Query 476063 AACAAA---CTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCT 476119 |||||| |||||| ||| | || | || || || |||||||| |||| ||||| Sbjct 49080 AACAAAATGCTTGGAGAGTTTGAACTCCAGGGCATCCCACCTGCTCCACGAGGTCTTCCT 49139 Query 476120 CAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGAT 476179 ||||||||||| || || ||||||||||| ||||||||| | | |||| |||| ||| Sbjct 49140 CAAATTGAAGTGACCTTCGATATTGATGCGAATGGTATTGTAACTGTTTCTGCCAAGGAT 49199 Query 476180 AAATC 476184 ||||| Sbjct 49200 AAATC 49204 >seq14764 Length=84029 Score = 120 bits (132), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || || | ||||||||| || || | || |||||||| ||||| Sbjct 1955 ACGCAGGCGAAGAACCAAATGAAGTGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGT 2014 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| || ||||| ||||| || | | || ||||| || |||||||| Sbjct 2015 ACGGCCATCTTCAAGCTGTTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGAATTCC 2074 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| ||||||||| ||| ||| ||||| || || | | | || | ||| Sbjct 2075 CTCCTTGTCCTGAATCTTTGTTTTAACATTATCAATGGTGTCTGAACTCTCAACCTCCAA 2134 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||||| || || ||||||||||| ||||| ||||| Sbjct 2135 GG-TAATAGTCTTTCCAGTGAGAGTCTTGACGAAGATTTG 2173 Score = 104 bits (114), Expect = 2e-16 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616 |||||| ||||| || || || ||||| || || || || || ||||| | | Sbjct 2765 ACGGAGAACAAGGTGGAGAGTTGACTCTTTTTGAATGTTGTAGTCGGCAAGAGTACGGCC 2824 Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| ||||||||||| || || || | |||||| ||||| || ||||||||||| || Sbjct 2825 ATCTTCTAGTTGCTTTCCTGCGAAGATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTT 2884 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 |||||| ||||| |||||| || || || || | | | | ||| || || | Sbjct 2885 GTCTTGGATCTTGGTTTTGACGTTGTCTATGGTGTCTGAACTCTCGA-CTTCGAGAGTGA 2943 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || |||||||| || || || ||||| ||||| Sbjct 2944 TTGTCTTACCGGTAAGGGTTTTCACGAAGATTTG 2977 Score = 100 bits (110), Expect = 2e-15 Identities = 158/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||| ||||| || || || | ||| |||||||| | ||| Sbjct 1727 ACGAAGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAAAGT 1786 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| || ||||| ||||||||||| | | || || ||||| || || || Sbjct 1787 ACGACCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGGGGGATCCC 1846 Query 480671 TTCCTTGTCTTGAATCTTTTGT-TTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCA 480728 |||||||||||| || ||| || || || ||||| || || | | | | || | || Sbjct 1847 TTCCTTGTCTTGGAT-TTTCGTCTTCACGTTGTCAATGGTGTCCGAGCTCTCAACCTCCA 1905 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||| || || || || ||||||||||| ||||| || || Sbjct 1906 A-GGTGATCGTCTTTCCTGTGAGAGTCTTGACGAATATCTG 1945 >seq4947 Length=56615 Score = 116 bits (128), Expect = 2e-20 Identities = 139/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 474680 GTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGC 474738 ||||| |||||||||| | || || ||| | || |||||| || ||| || | || Sbjct 32828 GTTTTGACCAAAATGAAGGAGACTGCAGAGG-CTTACCTTGGAAAAACAGTTACCAAGGC 32770 Query 474739 AGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGG 474798 || | || |||||||| || || |||||| |||| | |||||||| |||||||| || Sbjct 32769 CGTTGTAACCGTTCCAGCTTACTTCAATGATGCTCAGAGACAAGCAACAAAAGATGCTGG 32710 Query 474799 AAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGC 474858 ||||||||||| || ||||| | |||||||||||||| || || || || ||| | Sbjct 32709 GAGAATTGCAGGACTGGATGTTCAGAGAATTATTAATGAACCCACTGCTGCTGCTCTTTC 32650 Query 474859 TTATGG 474864 |||||| Sbjct 32649 TTATGG 32644 >seq5800 Length=18681 Score = 107 bits (118), Expect = 1e-17 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 |||||||||||||| || ||||| |||||| | ||| || || || || || | | Sbjct 1951 AGACGGAGTACAAGGTGGAGTGTTGATTCTTTCTGGATATTGTAGTCGGCAAGGGTGCGG 1892 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || || || || ||||| || || | ||| ||||| || || ||||| |||||| Sbjct 1891 CCATCCTCTAGCTGTTTCCCAGCGAAGATCAAACGCTGTTGGTCTGGGGGAATCCCTTCC 1832 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGT 480733 |||||||| ||||| || || ||||| ||||| | | | | || || || Sbjct 1831 TTGTCTTGGATCTTAGTCTTAACGTTGTCAATGGTATCGGAACTCTCGA-CCTCGAGAGT 1773 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| |||||||||||||| ||||| ||||| Sbjct 1772 TATTGTTTTGCCGGTGAGAGTCTTGACGAAGATTTG 1737 Score = 96.9 bits (106), Expect = 2e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||||||||| ||| || || || || || ||||| || || Sbjct 3551 ACGAAGACGAAGGACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGTGT 3492 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || |||||||||||| || || ||||| ||||| | || ||||| || ||||| || Sbjct 3491 CCTTCCATCTTCAAGTTGTTTCCCGGCAAAGATAAGTCTCTGCTGATCTGGCGGAATACC 3432 Query 480671 TTCCTTGTCTTGAATCTT 480688 ||||| || |||||||| Sbjct 3431 CTCCTTATCCTGAATCTT 3414 >seq6393 Length=62329 Score = 104 bits (114), Expect = 2e-16 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| ||||| || || |||||| || || | || ||||||||||||||| ||| Sbjct 661 ACTGTGCCAGCCTACTTCTCTGATTCACAGCGAAAGGCCACTAAAGATGCGGGAGCCATT 602 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || |||||||||||| | ||||| || ||||| ||||| || || || | ||||| ||| Sbjct 601 GCTGGTCTTAATGTTGTTCGTATCATCAATGAGCCAACTGCTGCTGCCATGGCTTACGGT 542 Query 474866 CTTGATA 474872 ||||||| Sbjct 541 CTTGATA 535 >seq16595 Length=7721 Score = 102 bits (112), Expect = 5e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||||||||| |||||||| || || | |||||| ||||| || ||||||||||||||| Sbjct 607 TCTTCAAGTTGTTTTCCAGCGAAGATCAAACGTTGCTGATCTGGGGGAATTCCTTCCTTG 548 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| ||||| |||||| ||||| || |||| | | | || || ||||| Sbjct 547 TCTTGGATCTTGGTTTTGACGTTGTCAATGGTGTCAGAACTCTCGA-CCTCGAGAGTAAT 489 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || ||||| ||||| Sbjct 488 GGTTTTGCCAGTAAGGGTTTTCACGAAGATTTG 456 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || ||||| ||||| ||| || || | ||||||||||| | || Sbjct 1951 ACGGAGACGAAGGACAAGGTGAAGAGTAGACTCCTTTTGGATGTTATAATCAGCCAAGGT 1892 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| ||||| ||||||||||| | ||| || || || || ||||| || Sbjct 1891 ACGTCCATCCTCAAGCTGCTTACCAGCAAAAATCAAACGCTGCTGGTCTGGGGGAATCCC 1832 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||| || |||||||| || ||| ||||| ||||| | | | | | | ||| Sbjct 1831 CTCCTTATCCTGAATCTTGGTCTTAACATTATCAATGGTATCTGAGCTCTCCACCTCCAA 1772 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || || | ||||| || || || || Sbjct 1771 -GGTAATGGTCTTCCCAGTCAATGTCTTGACAAATATCTG 1733 >seq1525 Length=87267 Score = 93.3 bits (102), Expect = 3e-13 Identities = 103/140 (74%), Gaps = 12/140 (9%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || ||| |||| ||||| || |||||||||||| |||| | |||||||| |||||||| Sbjct 5154 GCTGTAGTTACAGTTCCTGCTTATTTTAATGATGCTCAGAGGCAAGCAACAAAAGATGCT 5095 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCA------------ACA 474844 |||| || ||||| || |||| ||| || |||||||||||| || Sbjct 5094 GGAAAGATCGCAGGCCTGGATGTGCAACGGATCATTAATGAACCANNNNNNNNNNNNACT 5035 Query 474845 GCAGCCGCACTTGCTTATGG 474864 ||||| |||||||| ||||| Sbjct 5034 GCAGCTGCACTTGCGTATGG 5015 >seq5306 Length=221055 Score = 87.8 bits (96), Expect = 1e-11 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 474753 CAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTC 474812 |||| ||||| |||||| | || | ||||| || |||||||| |||| ||||| ||| Sbjct 19875 CAGCTTATTTCAATGATGCCCAGAGGCAAGCTACCAAAGATGCAGGAATCATTGCTGGTT 19816 Query 474813 TTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATA 474872 | ||||| | |||||||||||||||||||| || || |||| ||||| | || | Sbjct 19815 TGAATGTCGCTAGGATTATTAATGAACCAACAGCGGCAGCCATTGCCTATGGGTTAGACA 19756 Query 474873 AGA 474875 ||| Sbjct 19755 AGA 19753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3263145918066320