Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20hypochondriacus_20[genbank_20GCA_5F000753965.1_202014- 09-10] 117,340 sequences; 502,147,592 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq7582 298 4e-75 seq14104 147 2e-29 seq3496 147 2e-29 seq4947 145 6e-29 seq815 136 3e-26 seq14666 122 6e-22 seq2839 122 6e-22 seq6393 118 8e-21 seq90508 111 1e-18 seq7103 102 6e-16 seq109889 93.3 3e-13 seq5306 91.5 1e-12 seq77292 86.0 5e-11 >seq7582 Length=33282 Score = 298 bits (330), Expect = 4e-75 Identities = 499/708 (70%), Gaps = 34/708 (5%) Strand=Plus/Plus Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 ||||||||||||||| ||||| | | ||||| || | ||||| | || | |||| Sbjct 5982 ATTATCAAAATCTTCCCCTCCAAGATGAGTATCACCAGCAGTAGCCTTAACCTCAAAAAT 6041 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 || ||||||| | | || | |||||| || || ||||| | ||| || || || Sbjct 6042 CCCTTCTTCAATGGTGAGAATCGAAACATCGAAAGTACCTCCACCAAGATCGAATATCAG 6101 Query 282310 TACATTCATTTCTTTG----TCTTGG----TTTTTATCAAGACCATACGCAAAAGCAGCA 282361 ||||| ||||| ||| | || ||||| | |||||| |||| ||||||| Sbjct 6102 CACATT--TTTCTCACCCGATCTAGAACCCTTCTTATCCAAACCATAAGCAATAGCAGCA 6159 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||| || ||||||||||| ||||||||||| | |||| ||| ||||||||| || Sbjct 6160 GCAGTAGGCTCATTAATAATCCTCAAAACATTCAACCCAGAAATCGATCCTGCATCCTTT 6219 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACT 282481 || ||||| ||||||||||| |||||||| ||||||||||| | ||| ||| ||||| | Sbjct 6220 GTAGCTTGCCTTTGTGAATCATTAAAATAAGCAGGAACAGTTACAACACCAT-TGTTAAT 6278 Query 282482 TCT-TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 282540 || | ||| | |||||| || ||| |||||||| |||||| |||||| ||||| Sbjct 6279 ACTCTGTCCTAAATAAGCTTCAGCGATTTCCTTCATTTTGGTTAAAACCATTGAAGAAAT 6338 Query 282541 TTGTTCTGGA--GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAAT-AT-GGTT 282596 | ||| ||| ||| ||| ||| ||| || |||||| || | ||| || |||| Sbjct 6339 CTCTTCCGGAGCGAACATTTTTTG--TTCTCCTTTATATGAGAC--GATAATCATCGGTT 6394 Query 282597 TATTAC---CAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAAC--ACT 282651 ||| | || | || ||| ||||| ||||| ||||||| || ||||| || || Sbjct 6395 TATCGCCTTCACCGGGAACAACCTTAAACGGCCATAATTTCATGTCGGATTGTACTGAC- 6453 Query 282652 TTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 282711 || || || ||| || | ||||| || || |||| || || ||||| Sbjct 6454 --GG--ATCGGAA----NACCGATGAGACGTTTAGCGTCGAAAACGGTGTTTTGAGGATT 6505 Query 282712 AACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAAC 282771 | ||| |||||| ||| || || || || || | | |||| || || ||||| | || Sbjct 6506 CATTGCGACTTGATTTTTTGCGGCGTCGCCGATTAAACGTTCGGTGTCGGTAAACGCGAC 6565 Query 282772 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 282831 ||| ||||| ||||| | || ||||||||||| | ||| || || || | ||| | Sbjct 6566 ATACGATGGGGTTGTTCTGTTTCCTTGATCATTTGGAATGATCTCGACGCGGTCGTTTCG 6625 Query 282832 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 ||| |||||||||||||| | |||||||||||||| || ||||| || Sbjct 6626 CCAAACACCTACACAACTGTAGGTTGTTCCTAAATCGATTCCAATGGC 6673 >seq14104 Length=24566 Score = 147 bits (162), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 282268 AAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT----- 282322 ||||| ||||||| || || ||||| | |||||| ||||| |||||| |||| Sbjct 22391 AAGAGAAACATCAAAAGTACCCCCACCAAGATCAAAGATAAGAACATTCTTTTCACCAAC 22332 Query 282323 --TTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 282378 |||| || || |||||||||||||| |||| ||||||||||||||| || ||||| Sbjct 22331 ACTTGT---GGCCTTCTTATCAAGACCATAAGCAATAGCAGCAGCAGTTGGCTCGTTAAT 22275 Query 282379 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 282438 || | || ||||| | ||||| ||| ||| ||||||||||| ||||| | ||| || Sbjct 22274 GATACGCATCACATTCAAACCAGAGATTACTCCAGCATCTTTAGTAGCTTGACGTTGAGA 22215 Query 282439 ATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || || || || ||||||||||||| || |||| Sbjct 22214 GTCATTGAAGTAGGCAGGAACAGTAACGACAGCAT 22180 Score = 122 bits (134), Expect = 6e-22 Identities = 320/482 (66%), Gaps = 5/482 (1%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGT-GACTTCAATTTGAGGGAC 281484 |||| ||||| | |||||||||||||| | ||||| || ||| |||||||| Sbjct 1381 GCAGAGACATTCAAGATACCATTGGCATCAATGTCAAAGCACNACAGTAATCTGAGGGAC 1440 Query 281485 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 281544 ||||| | || || || || || | | |||| | |||| || || || | Sbjct 1441 ACCTCTAGGGGCTGGGGGAATGCCAGAAAGCTCAAATTTACCCAACAAGTTGTTGTCCCT 1500 Query 281545 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 281604 || ||| ||| || || | | |||||| || ||| ||| || || || || Sbjct 1501 GGTCCTGGTTCTTTCTCCTTCATATACTTGGATCAATACACCAGGTTGGTTGTCAGAGTA 1560 Query 281605 AGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 ||||| || ||| || || || || || ||||| || |||| || Sbjct 1561 AGTTGAGAAAACTTGCTCCTTCTTGGTTGGGATAGTGGTGTTCCTTGGGATAAGGACAGT 1620 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| | ||||||||| || || | ||| || || |||||||||||||||| || | | Sbjct 1621 CATGACACCACCAGCAGTCTCAAGACCGAGGGAGAGAGGAGTGACATCAAGAAGCAAGAG 1680 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCAT 281783 | ||| | || || | || |||| ||||| |||| ||||| | ||||||||||| Sbjct 1681 GTCTTGCACCTTCTCGTTTCCTTCACCACTCAAGA-TAGCAGCTTGGACAGCAGCACCAT 1739 Query 281784 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TT 281842 | |||||||| |||||||| || | | ||| |||| |||||||| || |||| || Sbjct 1740 AAGCAACAGCCTCATCAGGGTTGATACTTTTGCAAAGTTCCTTACCATTAAAGAAATCTT 1799 Query 281843 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 | || || ||| |||||| ||||| | || ||||| ||||| | || | ||||| Sbjct 1800 GTAACAA-CTGTTGTACCTTGGGAATTCTAGTGGATCCACCAACAAGGACGACATCATGG 1858 Query 281903 AC 281904 || Sbjct 1859 AC 1860 Score = 105 bits (116), Expect = 5e-17 Identities = 161/224 (72%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||||| ||||||||| || || | ||| ||||| |||||||||||||| | || | Sbjct 23004 GTCATAACACCACCAGCAGTCTCAAGACCGAGAGAGAGAGGAGTGACATCGAGAAGCAAG 22945 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACC 281781 | | ||| | || || | || |||| ||||| |||| ||||| | ||||||||| Sbjct 22944 AGGTCTTGGACCTTCTCGTTTCCTTCACCACTCAAGA-TAGCGGCTTGGACAGCAGCACC 22886 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 281840 |||||||||||| ||||| || || | | ||| || | ||||| ||||| |||| Sbjct 22885 ATATGCAACAGCCTCATCCGGGTTGATACTTTTGCAAAGCTCCTTACCGTTGAAGAAATC 22826 Query 281841 TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCA 281884 ||| || || || ||||| ||||| | || ||||| ||| Sbjct 22825 TTGCAACAA-CTGCTGAACCTTGGGAATTCTAGTGGATCCACCA 22783 Score = 95.1 bits (104), Expect = 9e-14 Identities = 129/179 (72%), Gaps = 6/179 (3%) Strand=Plus/Plus Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCA 282352 ||||| ||||| |||||| |||| | | ||| || || ||||||||||| || Sbjct 3042 TCAAAGATAAGAACATTCTTTTCACCGACACTTGTGGCCTTCTTGTCAAGACCATAAGCG 3101 Query 282353 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 282412 | ||||||||| || || ||||||||||| | || |||||| | |||| || ||| Sbjct 3102 ATAGCAGCAGCGGTGGGCTCATTAATAATACGCATAACATTCAAGCCAGAGATGACTCCA 3161 Query 282413 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||||| || || || || | || ||||| || || || || |||||||| | ||| || Sbjct 3162 GCATCCTTGGTAGCCTGACGCTGAGAATCATTGAAGTAGGCTGGAACAGTGACAACAGC 3220 >seq3496 Length=88706 Score = 147 bits (162), Expect = 2e-29 Identities = 143/184 (78%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | || |||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 46819 CCATAGGAAAGAGCAGCGGCAGTTGGTTCATTAATAATTCTCTGGACATCTAGTCCAGCA 46760 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 |||||||| |||||||| || ||||||||||| | ||| || || || || |||||||| Sbjct 46759 ATTCTTCCAGCATCTTTCGTAGCTTGTCTTTGAGCATCATTGAAGTAAGCTGGAACAGTG 46700 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 | || || | || ||| |||||||| ||||| ||| |||| |||||||| | Sbjct 46699 ACTACAGCTTTGGTAACTGTTTTTCCAAGGTAAGCCTCTGCAGTTTCCTTCATTTTTGTC 46640 Query 282524 AAAA 282527 |||| Sbjct 46639 AAAA 46636 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 || || | |||||| || ||||||||||||||||| ||| | | ||||||| || ||| Sbjct 46819 CCATAGGAAAGAGCAGCGGCAGTTGGTTCATTAATAATTCTCTGGACATCTAGTCCAGCA 46760 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 ||| | ||| ||| || |||||||| || || ||||| || || ||||| ||||| Sbjct 46759 ATTCTTCCAGCATCTTTCGTAGCTTGTCTTTGAGCATCATTGAAGTAAGCTGGAACAGTG 46700 Query 86239 ATAACTGCTTTATTAATAGGTTTT 86262 | || ||||| ||| | |||| Sbjct 46699 ACTACAGCTTTGGTAACTGTTTTT 46676 >seq4947 Length=56615 Score = 145 bits (160), Expect = 6e-29 Identities = 209/292 (72%), Gaps = 17/292 (6%) Strand=Plus/Plus Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT---TCTTTGTC 282327 || ||||||| |||||||||||| | |||||||| | || | | || |||| Sbjct 32580 AGAAACATCAAAGGTTCCACCACCAAGATCAAAAAC---TGCAATAAGACCCTCCTTGT- 32635 Query 282328 TTGGTTTTTATCAAGACC-ATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386 ||||| |||| ||| | || |||||||||||| |||||||||||||||||| Sbjct 32636 -TGGTT--------GACCCATAAGAAAGAGCAGCAGCAGTGGGTTCATTAATAATTCTCT 32686 Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446 ||||| || || |||||||| || |||||||| || |||||||| || | ||| || | Sbjct 32687 GAACATCCAGTCCTGCAATTCTCCCAGCATCTTTTGTTGCTTGTCTCTGAGCATCATTGA 32746 Query 282447 AATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTG 282506 | || || ||||| || | |||||| | || ||| |||||||| ||||| ||| | Sbjct 32747 AGTAAGCTGGAACGGTTACAACGGCCTTGGTAACTGTTTTTCCAAGGTAAGCCTCTGCAG 32806 Query 282507 TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTG 282558 | | |||||||| | |||| | | | |||||| ||||||||||| Sbjct 32807 TCTCCTTCATTTTGGTCAAAACAAAGGCTCCAATTTGACTAGGAGAATATTG 32858 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 || || | |||||| || ||||| ||||||||||| ||| | ||||||| | || ||| Sbjct 32644 CCATAAGAAAGAGCAGCAGCAGTGGGTTCATTAATAATTCTCTGAACATCCAGTCCTGCA 32703 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 ||| | ||| ||| |||||||||||||| || ||||| || || ||||| || || Sbjct 32704 ATTCTCCCAGCATCTTTTGTTGCTTGTCTCTGAGCATCATTGAAGTAAGCTGGAACGGTT 32763 Query 86239 ATAACTGCTTTATTAATAGGTTTT 86262 | ||| || || ||| | |||| Sbjct 32764 ACAACGGCCTTGGTAACTGTTTTT 32787 >seq815 Length=81296 Score = 136 bits (150), Expect = 3e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || |||||||| || | ||| ||||||||||||||||| ||||| | || |||| Sbjct 5591 TTCTTGTCGAGACCATATGCGATAGCTGCAGCAGTTGGTTCATTGATAATGCGCATAACA 5532 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 ||||| |||||||| || |||||||| || || || | ||| |||||||| |||||| Sbjct 5531 TTAAGTCCAGCAATGACACCAGCATCTTTTGTAGCCTGACGTTGAGAATCGTTGAAATAT 5472 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 ||||||||||| || || |||| | || | |||||||| || ||| ||| | Sbjct 5471 GCAGGAACAGTTATCACTGCATTCTTCACGGTTGAGCCAATATATGCCTCAGCTATTTCT 5412 Query 282512 TTCATTTT 282519 ||||| || Sbjct 5411 TTCATCTT 5404 Score = 100 bits (110), Expect = 2e-15 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 || |||||||||||| || ||| | || | |||| |||||| || || ||||| ||| Sbjct 2517 CATAAATAGTATTGGCAGGGTTAGCAACAACCTGATTTTTGGCAGCTTCACCAATGAGAC 2458 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 ||| || || || |||| || | || || || || | |||||||||||||| | | Sbjct 2457 GTTGAGTTTCAGTGAATGCTACCCAAGAAGGCGTAGTTCTGTTACCTTGATCATTTGTTA 2398 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | |||||||| ||| | |||||| || |||||| | |||||||| ||||| | Sbjct 2397 TGATTTCAACACGGTCATGCTCCCATACTCCCACACAAGAGTATGTTGTTCCCAAATCGA 2338 Query 282870 TACCAATAGC 282879 | || ||||| Sbjct 2337 TTCCTATAGC 2328 >seq14666 Length=16394 Score = 122 bits (134), Expect = 6e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 || || ||||| ||||||| |||| || || ||||| | ||| || || ||||| || Sbjct 16390 TTAGCAGCATCACCAATCAATCGTTCAGTATCCGTAAAAGCAACGTAAGAGGGAGTCGTT 16331 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 | ||| ||||||||||||||||||||||||||| || ||| ||||||||| |||||||| Sbjct 16330 CTATTCCCTTGATCATTCGCAATAATTTCAACTCTATCATGTTGCCATACTCCTACACAT 16271 Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | || || || | |||||| ||||| || Sbjct 16270 GAGTATGTCGTCCCAAGATCAATTCCAATCGC 16239 >seq2839 Length=53906 Score = 122 bits (134), Expect = 6e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 ||| |||| ||||| |||| ||||| |||||||||||||| ||||| | || |||||| Sbjct 44865 TTACCAAGCCCATAGGCAATTGCAGCCGCAGTTGGTTCATTGATAATGCGCATGACATTA 44924 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 || || ||||| | || ||||||||||| ||||| | |||||||| |||||||| || Sbjct 44925 AGTCCTGCAATGGTACCAGCATCTTTAGTTGCTTGCCGCTGTGAATCATTAAAATAGGCT 44984 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || ||||| | || |||| | | || | | |||| || | |||||| | ||| Sbjct 44985 GGCACAGTGACTACAGCATTTTTCACATTCATGCCAAGGTAGGTCTCTGCTGTCTCCTTC 45044 Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTT 282561 || || | | | |||||| || || | || ||| | ||| ||| Sbjct 45045 ATCTTCATCAGGACCATTGAAGATATCTCCTCGGGAACAAATTTCTT 45091 >seq6393 Length=62329 Score = 118 bits (130), Expect = 8e-21 Identities = 157/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 282336 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 282395 |||||||||| || || | |||||||||||||| ||||| || || | | |||||||| Sbjct 535 TATCAAGACCGTAAGCCATGGCAGCAGCAGTTGGCTCATTGATGATACGAACAACATTAA 594 Query 282396 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 282455 |||||||||| ||| |||||||||||||| | || |||||||| || || || | Sbjct 595 GACCAGCAATGGCTCCCGCATCTTTAGTGGCCTTTCGCTGTGAATCAGAGAAGTAGGCTG 654 Query 282456 GAACAGTAATAACGGCATCTGTTACTTCTT--TTCCAATATAAGCGCTTGCTGTTTGTTT 282513 | ||||| | ||| || | | | | |||| | ||| | |||| || | | ||| Sbjct 655 GCACAGTTACAACAGCGTTTTTGA--TCTTGCTACCATAAAAAGCCTCGGCAATATCTTT 712 Query 282514 CATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 282549 ||| || ||| || ||||||||| || | |||||| Sbjct 713 CATCTTCATTAGAACCATTGATGATATCTCTTCTGG 748 >seq90508 Length=363 Score = 111 bits (122), Expect = 1e-18 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || |||| |||||| || |||| ||||||||| || |||||||||||||| | || Sbjct 57 TTCTTCTCAAAACCATAAGCCAAAGAAGCAGCAGTCGGCTCATTAATAATTCTAAGTACT 116 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | || |||||||| | |||||||| || || ||| ||||| || || ||||| || Sbjct 117 TCCAGCCCAGCAATACGGCCTGCATCCTTTGTTGCTGTCCTTTGAGAGTCATTAAAGTAA 176 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTT 282482 ||||| || |||| || || | |||||||| Sbjct 177 GCAGGTACTGTAACCACTGCCTTTGTTACTT 207 >seq7103 Length=48943 Score = 102 bits (112), Expect = 6e-16 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTT--GGATTAACTGCAGCTTGA 282724 ||||||||| | |||||| | |||||||| || | ||| ||||| | | |||||| Sbjct 14924 TCTACCAATAAGTCGTTTAACGTCAAAAATTGT--TCGTTCAGGATTTAAAGATGCTTGA 14981 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 282784 | ||||| || |||||||||| ||| || || || || | || |||| || || Sbjct 14982 TTCTTGGCAGCTTCTCCAATCAACCTTTCAGTATCAGTGAAAGCTACCCATGAAGGTGTG 15041 Query 282785 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACA 282844 | | |||||||||||||| || |||||||| || | |||| || |||| || ||| Sbjct 15042 ATCCTGTTACCTTGATCATTGGCTATAATTTCCACATGCCCATCTTTATATACTCCAACA 15101 Query 282845 CAACTAAAAGTTGTTCCTAAATCAATACCAAT 282876 || | | || ||||| | ||| |||||||| Sbjct 15102 CATGAATATGTCGTTCCCAGATCTATACCAAT 15133 >seq109889 Length=584 Score = 93.3 bits (102), Expect = 3e-13 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 432283 TGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTG 432342 ||| || ||||||||||| || ||||| || ||||||||||| || || ||| | |||| Sbjct 230 TGAAAGCCAAAGAAGGTCGCATAAGAGGCAACTTGATGGGAAAACGAGTGGATTTTTCTG 171 Query 432343 CACGTACAGTTATTACTTCTGATCCTAATAT 432373 ||||||| |||||||| ||||||| ||||| Sbjct 170 CACGTACTGTTATTACACCTGATCCAAATAT 140 >seq5306 Length=221055 Score = 91.5 bits (100), Expect = 1e-12 Identities = 175/256 (68%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 |||||| ||||||||| | ||| | ||| || || |||| |||| || | | Sbjct 19622 AATCTT-ACCTCCCAAGTGAGTGTCTCCGTTGGTTGCAAGAACTTCAAAAACACCGTTGT 19680 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 ||| | ||| | | | ||||| ||||||||||| | ||||| | ||| | ||| Sbjct 19681 CAATGGTCAAGACACTGACATCGAATGTTCCACCACCAAGGTCAAAGACAAGGATGTTCT 19740 Query 282318 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377 | || | | || || | ||||| |||| || || || ||||||||||||| Sbjct 19741 TCTCACCACCCC---TCTTGTCTAACCCATAGGCAATGGCTGCCGCTGTTGGTTCATTAA 19797 Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437 |||| || ||||| | ||||||||| ||||||||||||| || ||||| || || | Sbjct 19798 TAATCCTAGCGACATTCAAACCAGCAATGATTCCTGCATCTTTGGTAGCTTGCCTCTGGG 19857 Query 282438 AATCGTTAAAATATGC 282453 ||| || ||||| || Sbjct 19858 CATCATTGAAATAAGC 19873 >seq77292 Length=307 Score = 86.0 bits (94), Expect = 5e-11 Identities = 123/170 (72%), Gaps = 5/170 (3%) Strand=Plus/Minus Query 281732 AGTTT-TTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 ||||| |||| | || |||| ||||| | | |||||| |||||||||||| ||||| Sbjct 247 AGTTTCTTCACCTCCTTCACCACTAAGAACACCACCTTGAACAGCAGCACCATAAGCAAC 188 Query 281791 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT--TTGAAAGA 281848 ||| |||||||| |||||| | ||| | | |||||| | || |||| || || | Sbjct 187 AGCCTCATCAGGGTTAACACCCTTATTAGGCTCTTTACCCTCAAAGAAATCCTTCAA--A 130 Query 281849 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 || ||| | ||||||||| | || ||||||||| | |||||| || Sbjct 129 AGCTGTTGAATCTTAGGAATCCTAGTGCTTCCTCCAACAAGTACAATCTC 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3734869501878840