Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20hypochondriacus_20[genbank_20GCA_5F000753965.1_202014- 09-10] 117,340 sequences; 502,147,592 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq14764 84.2 2e-11 >seq14764 Length=84029 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||||||||||||||||||||||||| | ||||| |||||| || || || || | Sbjct 2785 TTGACTCTTTTTGAATGTTGTAGTCGGCAAGAGTACGGCCATCTTCTAGTTGCTTTCCTG 2844 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| | ||| || |||||||| || || |||||||| || || || ||| | Sbjct 2845 CGAAGATCAAACGTTGCTGATCTGGTGGAATTCCTTCTTTGTCTTGGATCTTGGTTTTGA 2904 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | || || | ||| ||||||| || | || ||||| || || |||| Sbjct 2905 CGTTGTCTATGGTGTCTGAACTCTCGACTTCGAGAGTGATTGTCTTACCGGTAAGGGTTT 2964 Query 132108 TTATGAAAATCTGCAT 132123 | | ||| || ||||| Sbjct 2965 TCACGAAGATTTGCAT 2980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475912130522400