Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20tuberculatus_20[genbank_20GCA_5F000180655.1_202009-06- 22] 15,440 sequences; 4,347,977 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq13418 98.7 1e-15 >seq13418 Length=231 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 6821 TCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATT 6880 || ||||||||||| | ||| ||| |||| || || || |||||||| | | Sbjct 38 TCTCCTTCATAGACCTGAATCAACACACCAGGCTGGTTGTCGGAGTATGTTGAGAACACT 97 Query 6881 TGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCC 6940 || || ||||| | || || || || ||||| || |||| |||||||| |||||| Sbjct 98 TGCTCCTTCTTGGTGGGGATTGTAGTGTTTCTTGGGATAAGGACGGTCATAACACCACCA 157 Query 6941 ATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGAT 7000 ||| ||||| |||||||| ||||| || || || | || || |||||||| || Sbjct 158 GCAGTCTCGAGACCAAGAGAGAGAGGAGTGACATCAAGAAGCAAGAGGTCTTGGACCTTC 217 Query 7001 TCGTTCCCTTCACC 7014 ||||| |||||||| Sbjct 218 TCGTTTCCTTCACC 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635010219369600