Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20tuberculatus_20[genbank_20GCA_5F000180655.1_202009-06- 22] 15,440 sequences; 4,347,977 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq13418 111 2e-19 >seq13418 Length=231 Score = 111 bits (122), Expect = 2e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 196445 AACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCG 196504 || |||||||| || |||| |||||||| | || | || || ||||| || || || Sbjct 216 AAGGTCCAAGACCTCTTGCTTCTTGATGTCACTCCTCTCTCTCTTGGTCTCGAGACTGCT 157 Query 196505 GGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAA 196564 |||||||||||||| |||| || ||||| || || || || |||||||| ||| Sbjct 156 GGTGGTGTTATGACCGTCCTTATCCCAAGAAACACTACAATCCCCACCAAGAAGGAGCAA 97 Query 196565 GTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGA 196623 || || ||||| || ||||| || || || ||||| ||||| || ||||||||||| Sbjct 96 GTGTTCTCAACATACTCCGACAACCAGCCTGGTGTGTTGATTCAGGTCTATGAAGGAGA 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657735432556800