Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amaranthus_20tuberculatus_20[genbank_20GCA_5F000180655.1_202009-06- 22] 15,440 sequences; 4,347,977 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq6526 95.1 9e-14 >seq6526 Length=237 Score = 95.1 bits (104), Expect = 9e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | || ||||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct 75 CCATAAGAAAGAGCAGCAGCAGTTGGTTCATTAATAATTCTCTGGACATCAAGTCCAGCA 16 Query 282404 ATTCTTCCTGCATCT 282418 |||||||| |||||| Sbjct 15 ATTCTTCCAGCATCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739872361249440