Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq4991 86.0 5e-12
seq1057 82.4 7e-11
seq1034 82.4 7e-11
>seq4991
Length=48504
Score = 86.0 bits (94), Expect = 5e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134
|||||| |||||||| || ||||| ||||| ||||| || ||| | || | || ||
Sbjct 8477 AGATCAGCAAAGACTCATTTTTGCTGGCAAGCAACTTGAGGATGGGAGGACGCTTGCTGA 8418
Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189
|||||||||||||||||||| || |||||| ||||| | || | || || |||
Sbjct 8417 CTACAATATTCAGAAGGAATCAACACTTCACCTGGTGCTTCGCCTCCGTGGTGGG 8363
>seq1057
Length=141302
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| ||||| | || || ||||| ||||| || || || || ||| | ||
Sbjct 136267 ATGCAGATATTTGTGAAGACCTTGACTGGCAAGACTATAACTTTGGAGGTGGAGAGCTCA 136208
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | || | ||| |||||| || |||||||| | || || ||
Sbjct 136207 GATACCATTGACAATGTAAAGACCAAAATTCAGGACAAAGAAGGGATTCCTCCGGACCAG 136148
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||||| || |||||||| || ||||| || || ||| || || |||| || |||||
Sbjct 136147 CAAAGGCTGATCTTTGCTGGAAAACAGCTTGAGGATGGCAGGACCTTGGCTGACTACAAC 136088
Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164
|||||||||||||| ||||| ||
Sbjct 136087 ATTCAGAAGGAATCAACTCTCCA 136065
>seq1034
Length=134858
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| |||||| | || || || || ||||| ||||| || || ||| | ||
Sbjct 72775 ATGCAGATATTCGTGAAGACCTTAACTGGCAAGACCATCACGCTGGAGGTGGAGAGCTCA 72834
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | || | ||| ||| ||| || ||||| || | || ||| ||
Sbjct 72835 GACACCATTGACAATGTGAAGGCAAAGATTCAAGACAAAGAGGGAATCCCTCCAGACCAG 72894
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| || | |||||||| || ||||| || |||||| || ||| |||| || |||||
Sbjct 72895 CAGAGGTTGATCTTTGCTGGAAAACAGCTTGAAGATGGCAGGACTTTGGCAGACTACAAC 72954
Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164
|| ||||||||||| ||||| ||
Sbjct 72955 ATACAGAAGGAATCAACTCTGCA 72977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428191036239695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |