Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq4991 86.0 5e-12 seq1057 82.4 7e-11 seq1034 82.4 7e-11 >seq4991 Length=48504 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134 |||||| |||||||| || ||||| ||||| ||||| || ||| | || | || || Sbjct 8477 AGATCAGCAAAGACTCATTTTTGCTGGCAAGCAACTTGAGGATGGGAGGACGCTTGCTGA 8418 Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 |||||||||||||||||||| || |||||| ||||| | || | || || ||| Sbjct 8417 CTACAATATTCAGAAGGAATCAACACTTCACCTGGTGCTTCGCCTCCGTGGTGGG 8363 >seq1057 Length=141302 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| ||||| | || || ||||| ||||| || || || || ||| | || Sbjct 136267 ATGCAGATATTTGTGAAGACCTTGACTGGCAAGACTATAACTTTGGAGGTGGAGAGCTCA 136208 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || |||||||| | || || || Sbjct 136207 GATACCATTGACAATGTAAAGACCAAAATTCAGGACAAAGAAGGGATTCCTCCGGACCAG 136148 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| || |||||||| || ||||| || || ||| || || |||| || ||||| Sbjct 136147 CAAAGGCTGATCTTTGCTGGAAAACAGCTTGAGGATGGCAGGACCTTGGCTGACTACAAC 136088 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 |||||||||||||| ||||| || Sbjct 136087 ATTCAGAAGGAATCAACTCTCCA 136065 >seq1034 Length=134858 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| |||||| | || || || || ||||| ||||| || || ||| | || Sbjct 72775 ATGCAGATATTCGTGAAGACCTTAACTGGCAAGACCATCACGCTGGAGGTGGAGAGCTCA 72834 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| ||| ||| || ||||| || | || ||| || Sbjct 72835 GACACCATTGACAATGTGAAGGCAAAGATTCAAGACAAAGAGGGAATCCCTCCAGACCAG 72894 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || ||||| || |||||| || ||| |||| || ||||| Sbjct 72895 CAGAGGTTGATCTTTGCTGGAAAACAGCTTGAAGATGGCAGGACTTTGGCAGACTACAAC 72954 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 || ||||||||||| ||||| || Sbjct 72955 ATACAGAAGGAATCAACTCTGCA 72977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428191036239695