Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq715 95.1 1e-14
seq1699 87.8 2e-12
>seq715
Length=381403
Score = 95.1 bits (104), Expect = 1e-14
Identities = 233/347 (67%), Gaps = 10/347 (3%)
Strand=Plus/Plus
Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260
|| ||||| ||||| || |||||||| ||||||| || | ||||| || || ||
Sbjct 115245 AAGCACGCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAAGTC 115304
Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320
|| || |||||||| || || ||||| ||||||||||| || ||| ||| || |||
Sbjct 115305 AACCCAGGCATCAACCC-CGCTTTTTCAACCAAAATATCGCGCAGAAGCTTCCAGAGAAG 115363
Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT-TTTTGTT 14379
|| || ||||| || ||| ||||| | | || || | ||||| ||| | |
Sbjct 115364 AAAATCCCCTCCACGCAAGCGAACGCGAGGAGCCGCTCCGCGAACGA--CTTGGATCCGT 115421
Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439
|| |||||||| ||||| |||| || || | | | || ||||| || ||
Sbjct 115422 CG--ATCCATTTCAGCGCCCACTCAGCCTTCTTCTGGACGCACGGCACCGTTTCGATGGC 115479
Query 14440 ATTAAATAAATGTTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14497
| || | | | |||||| || | | |||| | ||| || || | || | |||
Sbjct 115480 GTGGAAGAGTTTGTTCTTCTCATTGGAATCCTTG--ACGTAGGTTTCGAGCAGGAGACTA 115537
Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA 14544
||||| |||||||| ||||| || || || ||||| || || || ||
Sbjct 115538 TACATCTCAGAGTGAATGTTCTCGATGGCGATCTGGAAGCCGTATAA 115584
>seq1699
Length=96573
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/132 (75%), Gaps = 7/132 (5%)
Strand=Plus/Minus
Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262
||| ||||||||||| |||||||||||||||||| || || || ||||| ||||| ||
Sbjct 23309 ACAAGCAAAATCACAGTGAAGGCCCTCATCTCTAGAGATCAGCTCATTTGAGAATGTCAA 23250
Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAA--TGATCC-----GG 14315
|||||||| | ||| || || || | ||| || || ||| ||| ||| || |
Sbjct 23249 ACCTGGCATTAGTCCCCGCTTCTTAAGCCAGAAAATAGCACAGAAGCTGAACCAAGAAGA 23190
Query 14316 AAAAGAATATTC 14327
||| ||||||||
Sbjct 23189 AAATGAATATTC 23178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482178171812920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |