Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq715 95.1 1e-14 seq1699 87.8 2e-12 >seq715 Length=381403 Score = 95.1 bits (104), Expect = 1e-14 Identities = 233/347 (67%), Gaps = 10/347 (3%) Strand=Plus/Plus Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260 || ||||| ||||| || |||||||| ||||||| || | ||||| || || || Sbjct 115245 AAGCACGCGAAATCGCAGTGAAGGCCTTCATCTCGCGAGATCAACTCGTTCGAGAAAGTC 115304 Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320 || || |||||||| || || ||||| ||||||||||| || ||| ||| || ||| Sbjct 115305 AACCCAGGCATCAACCC-CGCTTTTTCAACCAAAATATCGCGCAGAAGCTTCCAGAGAAG 115363 Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT-TTTTGTT 14379 || || ||||| || ||| ||||| | | || || | ||||| ||| | | Sbjct 115364 AAAATCCCCTCCACGCAAGCGAACGCGAGGAGCCGCTCCGCGAACGA--CTTGGATCCGT 115421 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 || |||||||| ||||| |||| || || | | | || ||||| || || Sbjct 115422 CG--ATCCATTTCAGCGCCCACTCAGCCTTCTTCTGGACGCACGGCACCGTTTCGATGGC 115479 Query 14440 ATTAAATAAATGTTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 | || | | | |||||| || | | |||| | ||| || || | || | ||| Sbjct 115480 GTGGAAGAGTTTGTTCTTCTCATTGGAATCCTTG--ACGTAGGTTTCGAGCAGGAGACTA 115537 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA 14544 ||||| |||||||| ||||| || || || ||||| || || || || Sbjct 115538 TACATCTCAGAGTGAATGTTCTCGATGGCGATCTGGAAGCCGTATAA 115584 >seq1699 Length=96573 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 7/132 (5%) Strand=Plus/Minus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| ||||||||||| |||||||||||||||||| || || || ||||| ||||| || Sbjct 23309 ACAAGCAAAATCACAGTGAAGGCCCTCATCTCTAGAGATCAGCTCATTTGAGAATGTCAA 23250 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAA--TGATCC-----GG 14315 |||||||| | ||| || || || | ||| || || ||| ||| ||| || | Sbjct 23249 ACCTGGCATTAGTCCCCGCTTCTTAAGCCAGAAAATAGCACAGAAGCTGAACCAAGAAGA 23190 Query 14316 AAAAGAATATTC 14327 ||| |||||||| Sbjct 23189 AAATGAATATTC 23178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482178171812920