Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq4991 100 2e-16 >seq4991 Length=48504 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||||| ||||| || ||||||||||||||||| | | ||| || |||| Sbjct 8835 AGAACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCACCAAGTGTACGACCATCT 8894 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || || || ||| ||||||| || || |||||| || | |||||||||||| Sbjct 8895 TCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCCGGTGGGATGCCTTCCTTATCC 8954 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| | || ||||| | ||| || ||| | || || | ||||| | Sbjct 8955 TGAATTT-TGGCTTTGACATTGTCAATGGTATCAGAGCTTTCCACCTCCAAAGTGATTGT 9013 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| || || | |||||| ||||| ||||||||| Sbjct 9014 TTTCCCAGTGAGTGTTTTCACAAAGATTTGCATT 9047 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| |||| ||||||||||||||| || ||||| |||||||| || Sbjct 8364 CCACCACGGAGGCGAAGCACCAGGTGAAGTGTTGATTCCTTCTGAATATTGTAGTCAGCA 8423 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | | ||| || | ||| ||||| ||| | || |||||||| ||||| || Sbjct 8424 AGCGTCCTCCCATCCTCAAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCTGGTGGT 8483 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || ||||| || |||| ||| || | ||| |||||| ||| | Sbjct 8484 ATACCCTCCTTGTCCTGGATTTTAGCCTTCACATTATCAATGGTGTCAGAACTCTCCACT 8543 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||| | ||||| |||| ||| || |||||||| ||||| Sbjct 8544 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTGACAAAAATCTGCAT 8590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379215616831905