Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq670 95.1 1e-14 seq1068 89.7 5e-13 seq1057 89.7 5e-13 >seq670 Length=332965 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| || || || |||||||||||| || || | ||||||||| ||||| || Sbjct 147837 GTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCTTCGAGCTGTTTTCCG 147778 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||| || || |||||||||||||| |||||||| ||||| || || || Sbjct 147777 GCGAAGATGAGGCGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 147718 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | ||| || || | || | ||||||||||| | ||| Sbjct 147717 ACATTATCTATGGTGTCAGAGCTTTCGACCTCTAGCGTGATTGTCTTGCCGGTTAGGGTT 147658 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| || ||||| Sbjct 147657 TTGACGAAGATCTGCAT 147641 >seq1068 Length=260286 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || || || || |||||||||||| || |||| ||||||||| ||||| || Sbjct 186295 GTGGACTCCTTCTGGATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGCTGTTTCCCG 186354 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||| || || |||||||||||||| || ||||| ||||| || || || Sbjct 186355 GCGAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTGTCTTGGATCTTGGCCTTG 186414 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || || ||||| | | || || || | || | ||||||||||| | ||| Sbjct 186415 ACGTTGTCTACGGTGTCGGAGCTCTCGACCTCGAGCGTGATTGTCTTGCCGGTTAGGGTT 186474 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| || ||||| Sbjct 186475 TTGACGAAGATCTGCAT 186491 >seq1057 Length=141302 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || |||||||| || || || || || || || ||||| ||| Sbjct 136071 GTTGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTCCTGCCATCCTCAAGCTGTTTTCCA 136130 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| ||||||| | |||||| || ||||| || ||||||||||| |||||| ||| Sbjct 136131 GCAAAGATCAGCCTTTGCTGGTCCGGAGGAATCCCTTCTTTGTCCTGAATTTTGGTCTTT 136190 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | || || | | || || || | ||| | |||||||| ||||| || Sbjct 136191 ACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAAGTTATAGTCTTGCCAGTCAAGGTC 136250 Query 143168 TTTACGAATATTTGCAT 143184 || || ||||| ||||| Sbjct 136251 TTCACAAATATCTGCAT 136267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506838408964080