Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq379 87.8 1e-12 >seq379 Length=244149 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||| |||| ||| | || ||||| || || ||||| ||||||| ||| | | | Sbjct 80261 CGCAGAACCAGATGAAGGGTGGACTCCTTCTGGATATTATAATCAGCCAAGGTCCTTCCG 80202 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||||||||||||| ||| || | ||| |||||||||| || || || || || Sbjct 80201 TCGTCCAATTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCCGGAGGAATACCCTCCTTG 80142 Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | ||||| || || | | |||||||| | | || || || || Sbjct 80141 TCCTGGATTTTCGCC---TTAACATTGTCTATCGTGTCAGAGCTCTCGACCTCAAGGGTA 80085 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| || || || || ||||| |||||||| ||||| Sbjct 80084 ATCGTCTTACCAGTTAGGGTTTTCACGAAAATCTGCAT 80047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318669714602562