Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1057 93.3 3e-14 >seq1057 Length=141302 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/158 (74%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | |||||||| ||||| |||| || |||||||||| |||| | ||||||| Sbjct 136111 CATCCTCAAGCTGTTTTCCAGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATCCCTTCTT 136170 Query 44025 TATC-TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTA 44083 | || |||| ||| | ||| || | ||| ||||||| |||||| || | || Sbjct 136171 TGTCCTGAATTTTGGTCTTT-ACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAAGTT 136229 Query 44084 ATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || || || || |||||||||||||| ||||| Sbjct 136230 ATAGTCTTGCCAGTCAAGGTCTTCACAAATATCTGCAT 136267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354657530953812