Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq1057 93.3 3e-14
>seq1057
Length=141302
Score = 93.3 bits (102), Expect = 3e-14
Identities = 117/158 (74%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| || | |||||||| ||||| |||| || |||||||||| |||| | |||||||
Sbjct 136111 CATCCTCAAGCTGTTTTCCAGCAAAGATCAGCCTTTGCTGGTCCGGAGGAATCCCTTCTT 136170
Query 44025 TATC-TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTA 44083
| || |||| ||| | ||| || | ||| ||||||| |||||| || | ||
Sbjct 136171 TGTCCTGAATTTTGGTCTTT-ACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAAGTT 136229
Query 44084 ATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || || || || |||||||||||||| |||||
Sbjct 136230 ATAGTCTTGCCAGTCAAGGTCTTCACAAATATCTGCAT 136267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354657530953812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |