Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq595 118 6e-22 seq196 118 6e-22 seq471 107 1e-18 seq203 107 1e-18 seq147 107 1e-18 seq643 105 3e-18 seq384 105 3e-18 seq9 104 1e-17 seq174 100 1e-16 >seq595 Length=199624 Score = 118 bits (130), Expect = 6e-22 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 11451 CAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||||||||||||| | | |||||||| ||||||||||||||||||||||||||||| | Sbjct 143411 CAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAA 143470 Query 11511 CCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| Sbjct 143471 CCAACTGAGCTAATGGGCC 143489 >seq196 Length=632613 Score = 118 bits (130), Expect = 6e-22 Identities = 84/96 (88%), Gaps = 1/96 (1%) Strand=Plus/Plus Query 11435 AGAATTAATA-AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 ||||||| | ||||| || ||||||||||| | | |||||||| |||||||||||||| Sbjct 509136 AGAATTAGTCGAAAAAACAGATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTA 509195 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||| ||||||||||||||| |||| Sbjct 509196 TTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 509231 >seq471 Length=305370 Score = 107 bits (118), Expect = 1e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 192159 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 192218 Query 11516 TGAGCTAATGGGCCGT 11531 ||||||||| |||||| Sbjct 192219 TGAGCTAATAGGCCGT 192234 >seq203 Length=405124 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 254503 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 254562 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 254563 CAACTGAGCTAATAGGCC 254580 >seq147 Length=430950 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 327114 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 327055 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 327054 CAACTGAGCTAATAGGCC 327037 >seq643 Length=186750 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 82758 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 82817 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 82818 CTGAGCTAATAGGCC 82832 >seq384 Length=488014 Score = 105 bits (116), Expect = 3e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 302832 AAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 302773 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||||| |||| Sbjct 302772 AACTGAGCTAATAGGCC 302756 >seq9 Length=748533 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 101923 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 101982 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 101983 TGAGCTAATAGGCC 101996 >seq174 Length=353366 Score = 100 bits (110), Expect = 1e-16 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 || ||||| | ||||| ||| | | |||||||| ||||||||||||||||||||||| Sbjct 311905 TATAAAATAGGACTGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGA 311846 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||| |||| Sbjct 311845 CGCTCTAACCAACTGAGCTAATAGGCC 311819 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261402702307444