Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq103 152 8e-33
seq4526 150 3e-32
seq1028 134 2e-27
seq2348 116 6e-22
seq574 113 7e-21
seq887 102 1e-17
seq199 86.0 1e-12
seq5972 82.4 1e-11
>seq103
Length=408496
Score = 152 bits (168), Expect = 8e-33
Identities = 181/243 (74%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || || | | || ||||| || ||||| || || ||||| ||||| || ||
Sbjct 310841 GCCAAGCGCCACCGTAAGGTC-CTTCGCGACAACATTCAGGGGATCACTAAGCCGGCGAT 310899
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|| ||||||||||||||||| || ||||||||| || || | |||| || ||||
Sbjct 310900 TCGGCGTCTGGCTCGTCGTGGCGGCGTCAAGCGTATCAGCGGCCTCATCTACGAGGAGAC 310959
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | || | ||||||||||| ||| ||| |||| |||||| | ||| |||||
Sbjct 310960 TCGCGGCGTCCTCAAGATCTTCCTAGAGAACGTCATCCGTGATGCAGTGACCTACACCGA 311019
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| |||||||| |||||| ||||||| ||||||| || |||| | || ||
Sbjct 311020 GCACGCCCGCCGTAAGACCGTCACCGCCATGGACGTCGTCTACGCTCTGAAGAGGCAGGG 311079
Query 16672 CCG 16674
|||
Sbjct 311080 CCG 311082
Score = 147 bits (162), Expect = 3e-31
Identities = 181/245 (74%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| | || || ||||| ||||| || || || || ||||| || ||
Sbjct 306238 GCCAAGCGCCACCGCAAGGTC-CTCCGAGACAACATTCAGGGGATTACGAAGCCGGCGAT 306296
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|| |||||||| |||||||| || ||||||||| || ||| | |||| || ||||
Sbjct 306297 TCGGCGTCTGGCCCGTCGTGGCGGTGTCAAGCGTATCAGTGGCCTCATCTACGAGGAGAC 306356
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | ||| | ||||||||||| ||| |||||||| ||| || | || |||||
Sbjct 306357 TCGCGGTGTCCTTAAGATCTTCCTTGAGAACGTTATCCGTGACGCGGTGACTTACACCGA 306416
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||| || || || ||||| | ||||| |||||||||| |||| | || ||
Sbjct 306417 GCACGCTCGCCGCAAAACCGTCACAGCTATGGACGTCGTCTATGCTCTGAAGAGGCAGGG 306476
Query 16672 CCGTA 16676
|||||
Sbjct 306477 CCGTA 306481
>seq4526
Length=49190
Score = 150 bits (166), Expect = 3e-32
Identities = 195/267 (73%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| | || ||||| || ||||| || || ||||| ||||| |||||
Sbjct 45411 GCCAAGCGCCACCGCAAGGTC-CTTCGTGACAACATTCAGGGTATCACTAAGCCGGCTAT 45469
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|| |||||||| ||||| || || |||||||| || ||| | |||| || ||||
Sbjct 45470 ACGGCGTCTGGCCCGTCGCGGCGGCGTCAAGCGCATCAGTGGCCTCATCTACGAGGAGAC 45529
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | || ||||||||| ||| |||||||| ||| || | ||| |||||
Sbjct 45530 CCGCGGTGTCCTCAAAATCTTCCTCGAGAACGTTATCCGTGACGCCGTGACCTACACCGA 45589
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| |||||||| |||||| ||||||| ||||||| || | || | || ||
Sbjct 45590 GCACGCCCGCCGTAAGACCGTCACCGCCATGGACGTCGTCTACGCTCTCAAGAGGCAGGG 45649
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
||| | | || || ||||| ||||
Sbjct 45650 CCGCACCCTCTACGGCTTTGGCGGTTA 45676
>seq1028
Length=224087
Score = 134 bits (148), Expect = 2e-27
Identities = 173/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|| ||||| || |||||||| || || || || |||||||||||||| | || || |||
Sbjct 213610 GACAACATTCAGGGAATCACGAAACCCGCGATTCGTCGTCTGGCTCGCAGAGGCGGCGTC 213551
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| || || || |||| || |||| | | | ||| | ||||||||||| ||
Sbjct 213550 AAGCGTATCAGCGGTCTGATCTACGAGGAGACTAGAGGAGTTCTCAAGATCTTCCTGGAG 213491
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| || || | ||||||| | || || |||||||| | | | ||||| ||||| ||
Sbjct 213490 AATGTGATTCGTGATGCTGTTACGTACACTGAGCACGCCAGAAGGAAGACGGTCACGGCC 213431
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| | |||||||| ||||| | || || | | ||||||| ||||| ||||
Sbjct 213430 ATGGATGTTGTCTATGCTTTGAAGAGGCAGGGGAGGACCCTTTATGGGTTTGGGGGTTA 213372
Score = 116 bits (128), Expect = 6e-22
Identities = 169/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|| ||||| || || ||||| ||||| || || || ||||||||||| | ||||||||
Sbjct 102729 GACAACATTCAGGGGATCACGAAGCCCGCGATTCGCCGTCTGGCTCGCAGAGGTGGAGTG 102670
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| | || || |||| || |||| | | ||| | ||||||||||| ||
Sbjct 102669 AAGCGTATAAGCGGTCTGATCTACGAGGAGACGAGAGGGGTTCTCAAGATCTTCCTGGAG 102610
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||||| | ||||||| | || || |||||||| | | ||||| || || |
Sbjct 102609 AATGTTATTCGTGATGCTGTTACGTACACTGAGCACGCCAGGAGGAAGACGGTGACGGCT 102550
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| | |||||||| ||||| | || || | | ||||||| ||||| ||||
Sbjct 102549 ATGGATGTTGTCTATGCTTTGAAGAGGCAGGGGAGGACTCTTTATGGGTTTGGGGGTTA 102491
>seq2348
Length=84247
Score = 116 bits (128), Expect = 6e-22
Identities = 169/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|| ||||| || || ||||| ||||| || || || ||||||||||| | ||||||||
Sbjct 44351 GACAACATTCAGGGGATCACGAAGCCCGCGATTCGCCGTCTGGCTCGCAGAGGTGGAGTG 44292
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|||||| | || || |||| || |||| | | ||| | ||||||||||| ||
Sbjct 44291 AAGCGTATAAGCGGTCTGATCTACGAGGAGACGAGAGGGGTTCTCAAGATCTTCCTGGAG 44232
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||||| | ||||||| | || || |||||||| | | ||||| || || |
Sbjct 44231 AATGTTATTCGTGATGCTGTTACGTACACTGAGCACGCCAGGAGGAAGACGGTGACGGCT 44172
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| | |||||||| ||||| | || || | | ||||||| ||||| ||||
Sbjct 44171 ATGGATGTTGTCTATGCTTTGAAGAGGCAGGGGAGGACTCTTTATGGGTTTGGCGGTTA 44113
>seq574
Length=196974
Score = 113 bits (124), Expect = 7e-21
Identities = 169/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| || |||| |||||| || |||||||| || ||||| ||||| || ||
Sbjct 114146 GCGAAGCGCCACCGCAAGGTTCTTCGCGACAACATCCAGGGGATCACGAAGCCGGCGATT 114205
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| || ||||| ||||| || ||||| |||||| || || | | || || ||||
Sbjct 114206 CGCCGCCTGGCCCGTCGCGGCGGAGTGAAGCGTATCAGCGGCCTCATTTACGAGGAGACG 114265
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || | ||||||||||| ||| ||| |||| || || | ||| ||||||
Sbjct 114266 CGCGGCGTGCTCAAGATCTTCCTGGAGAACGTGATCCGCGACGCCGTGACCTACACCGAG 114325
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| | ||||| || || | |||||| |||| || || ||||| | ||||||
Sbjct 114326 CACGCCCGTAGGAAGACGGTGACGGCGATGGATGTCGTGTACGCGCTGAAAAGGCAAGGC 114385
Score = 82.4 bits (90), Expect = 1e-11
Identities = 181/269 (67%), Gaps = 2/269 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| | || || || || |||||||| || ||||| ||||| || ||
Sbjct 116987 GCGAAGCGCCACCGCAAGGTC-CTCCGTGACAACATCCAGGGGATCACGAAGCCGGCGAT 117045
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|| || || || || ||||| || || |||||| | || | |||| || ||||
Sbjct 117046 TCGCCGCCTTGCCCGCCGTGGCGGCGTAAAGCGTATTAGCGGCCTCATCTACGAGGAGAC 117105
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | || | || || ||||| ||| || || | || || | ||| |||||
Sbjct 117106 TCGCGGCGTGCTCAAAATTTTCCTGGAGAATGTGATTCGCGACGCCGTGACCTACACCGA 117165
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| | ||||| || || | |||||| | ||||| || |||| | || ||
Sbjct 117166 GCACGCCCGGAGGAAGACAGTGACGGCGATGGATGTGGTCTACGCGCTGAAGAGGCAGGG 117225
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | | ||||| || || ||||||
Sbjct 117226 CAGGACATTGTATGGATTCGGCGGTTAAT 117254
>seq887
Length=362991
Score = 102 bits (112), Expect = 1e-17
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||| | || ||||||||||| || || ||||||||||| || ||
Sbjct 158299 GCGAAGCGCCATCGTAAGGTGCTCCGAGATAACATTCAGGGCATCACCAAGCCGGCGATT 158240
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| || |||||| | | ||||| || ||| | || || ||| |||| || ||||
Sbjct 158239 CGGCGGCTGGCTAGAAGGGGTGGCGTGAAGAGGATCAGCGGTTTGATCTACGAGGAGACC 158180
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
| | || ||||||||||| || ||| || |||| |||||| | ||| || |||
Sbjct 158179 AGAGGGGTCTTGAAGATCTTTCTGGAGAATGTGATCCGTGATGCCGTTACCTACACGGAG 158120
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656
|| || || ||||| ||||| |||||||| | || || ||
Sbjct 158119 CATGCCCGGCGAAAGACGGTCACAGCCATGGATGTGGTTTACGC 158076
>seq199
Length=675000
Score = 86.0 bits (94), Expect = 1e-12
Identities = 166/245 (68%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
||| | || ||||| ||||| ||||| |||| |||||| | | | |||| ||| ||
Sbjct 96778 CTTTGTGACAACATTCAAGGCATCACTAAGCTAGCTATTCTGCATTTGGCCTGTCAATGT 96837
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| ||| | || ||| | |||| || |||| || || ||| | || ||||||
Sbjct 96838 AACGTTGAGCATATCGGTGGCCTCATCTACGACGAGACTCATGGTGTCCTCAAAATCTTC 96897
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
||||||| || || ||||||| | ||| ||| || | || |||| || |||
Sbjct 96898 CTCAAGAACGCCATTTGTGATGCTGTGACCTACACCAAGAATGCCTGTTGTAAAACAGTC 96957
Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693
| | ||||||| ||| |||| ||| | || | ||||||| | | ||||| |||||
Sbjct 96958 AACACCATGGACATCATCTACGCACTCAATAGGTAAGGCCGCACCCTCTATGGCTTTGGC 97017
Query 16694 AGTTA 16698
||||
Sbjct 97018 TGTTA 97022
>seq5972
Length=22272
Score = 82.4 bits (90), Expect = 1e-11
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 16539 TCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTT 16598
|||| || |||| | | | ||| | ||||||||||| ||| || || | |||||||
Sbjct 21324 TCTACGAGGAGACTAGAGGAGTTCTCAAGATCTTCCTGGAGAATGTGATTCGTGATGCTG 21383
Query 16599 TCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCAT 16658
| || || |||||||| | | | ||||| ||||| |||||||| | |||||||| |
Sbjct 21384 TTACGTACACTGAGCACGCCAGAAGGAAGACGGTCACGGCCATGGATGTTGTCTATGCTT 21443
Query 16659 TGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||| | || || | | ||||||| ||||| ||||
Sbjct 21444 TGAAGAGGCAGGGGAGGACCCTTTATGGGTTTGGGGGTTA 21483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79049810608917
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