Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_006882.2
Length=45176
Score E
Sequences producing significant alignments: (Bits) Value
seq587 95.1 3e-15
seq1519 80.6 8e-11
>seq587
Length=401750
Score = 95.1 bits (104), Expect = 3e-15
Identities = 122/166 (73%), Gaps = 2/166 (1%)
Strand=Plus/Plus
Query 20109 ATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GT 20167
||| ||||||||||||||||||| |||||||| || || ||||| || ||||||||| ||
Sbjct 44403 ATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGT 44462
Query 20168 CAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGA 20227
||| || |||| || | |||||| | | ||| | |||||| || | ||
Sbjct 44463 CAA-GGTCGTGTAATTAATACTTAAGCTGATATTATTAATCATGGTAACCTTGGTATGGA 44521
Query 20228 AGTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCT 20273
||||||||| || | ||| |||||||||| || | || |||||
Sbjct 44522 AGTTATGCATGAACATAATACTCATAACTTTCCCATGGACCTAGCT 44567
>seq1519
Length=169030
Score = 80.6 bits (88), Expect = 8e-11
Identities = 94/127 (74%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 19674 GTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCGTTTACCCATTTGGG 19733
|| |||||| |||| | | |||| ||| || || || | | || ||| ||||
Sbjct 82748 GTTGCATATTCAGCTTCTGTTGCAGCTGCTACCGCCGTTTTCATGATCTATCCAATTGGT 82689
Query 19734 CAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTC 19793
|| ||||||||| ||||||||||||| | || |||||| ||||||| ||||||||| |
Sbjct 82688 CATGGGAGTTTTTCTGATGGTATGCCTTTAGGAATCTCTAGTACTTTCAACTTTATGATT 82629
Query 19794 GTATTCC 19800
||||||
Sbjct 82628 ATATTCC 82622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144393969389364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |