Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq587 109 9e-19 seq1519 86.0 1e-11 >seq587 Length=401750 Score = 109 bits (120), Expect = 9e-19 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 212388 TATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGC 212447 |||| |||| ||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct 44402 TATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAG 44461 Query 212448 ATCAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGA 212507 |||| || || ||||| | |||| || |||| | |||||||||||||| Sbjct 44462 TCAAGGTCGTGTAATTAATACTTAAGCTGATATTATTAATCATGGTAACCTTGGTATGGA 44521 Query 212508 AGTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 ||||||||| ||| ||| | || ||||| || | ||| |||| Sbjct 44522 AGTTATGCATGAACATAATACTCATAACTTTCCCATGGACCTAGC 44566 >seq1519 Length=169030 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 211926 CCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTT 211985 |||||| |||||| | | ||||| |||||| |||||||| |||| |||| ||| Sbjct 82776 CCGTTTGGGTATGTGCCGCTGGATTGCTGTTGCATATTCAGCTTCTGTTGCAGCTGCTAC 82717 Query 211986 CGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGG 212045 ||| || ||| | | || ||| | ||||| || || || || |||||||||||||| Sbjct 82716 CGCCGTTTTCATGATCTATCCAATTGGTCATGGGAGTTTTTCTGATGGTATGCCTTTAGG 82657 Query 212046 TATATCAGGAACATTCAACTTCATGTTCGTATTCC 212080 || || | || |||||||| ||| | |||||| Sbjct 82656 AATCTCTAGTACTTTCAACTTTATGATTATATTCC 82622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807274887495640